Discovery of Novel TASK-3 Channel Blockers Using a Pharmacophore-Based Virtual Screening

oleh: David Ramírez, Guierdy Concha, Bárbara Arévalo, Luis Prent-Peñaloza, Leandro Zúñiga, Aytug K. Kiper, Susanne Rinné, Miguel Reyes-Parada, Niels Decher, Wendy González, Julio Caballero

Format: Article
Diterbitkan: MDPI AG 2019-08-01

Deskripsi

TASK-3 is a two-pore domain potassium (K<sub>2P</sub>) channel highly expressed in the hippocampus, cerebellum, and cortex. TASK-3 has been identified as an oncogenic potassium channel and it is overexpressed in different cancer types. For this reason, the development of new TASK-3 blockers could influence the pharmacological treatment of cancer and several neurological conditions. In the present work, we searched for novel TASK-3 blockers by using a virtual screening protocol that includes pharmacophore modeling, molecular docking, and free energy calculations. With this protocol, 19 potential TASK-3 blockers were identified. These molecules were tested in TASK-3 using patch clamp, and one blocker (<b>DR16</b>) was identified with an IC<sub>50</sub> = 56.8 &#177; 3.9 &#956;M. Using <b>DR16</b> as a scaffold, we designed <b>DR16.1</b>, a novel TASK-3 inhibitor, with an IC<sub>50</sub> = 14.2 &#177; 3.4 &#956;M. Our finding takes on greater relevance considering that not many inhibitory TASK-3 modulators have been reported in the scientific literature until today. These two novel TASK-3 channel inhibitors (<b>DR16</b> and <b>DR16.1</b>) are the first compounds found using a pharmacophore-based virtual screening and rational drug design protocol.