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The dissolution of supercritical carbon dioxide (ScCO₂) in water forms a ScCO₂–H₂O system, which exerts a transformative influence on the physicochemical characteristics of coal and significantly impacts the CO₂-driven enhanced coalbed methane (CO₂-ECBM) recovery process. Herein, the effect of ScCO₂–H₂O treatment on the physicochemical properties of coal was simulated in a high-pressure reactor. The migration of major elements, change in the pore structure, and change in the CH₄ adsorption capacity of coal after the ScCO₂–H₂O treatment were detected using plasma emission spectroscopy, the low-temperature liquid nitrogen adsorption method, and the CH₄ adsorption method, respectively. The results show that (1) the ScCO₂–H₂O treatment led to mineral reactions causing a significant migration of constant elements in the coal. The migration of Ca ions was the most significant, with an increase in their concentration in treated water from 0 to 16–970 mg·L⁻¹, followed by Na, Mg, and K. Al migrated the least, from 0 to 0.004–2.555 mg·L⁻¹. (2) The ScCO₂–H₂O treatment increased the pore volume and pore-specific surface area (SSA) of the coal via the dissolution and precipitation of minerals in the coal pores. The total pore volume increased from 0.000795–0.011543 to 0.001274–0.014644 cm³·g⁻¹, and the total pore SSA increased from 0.084–3.332 to 0.400–6.061 m²·g⁻¹. (3) Changes in the CH₄ adsorption capacity were affected by the combined effects of a mineral reaction and pore structure change. The dissolved precipitates of the minerals in the coal pores after the ScCO₂–H₂O treatment caused elemental migration, which not only decreased the mineral content in the coal pores but also increased the total pore volume and total pore SSA, thus improving the CH₄ adsorption capacity of the coal. This study provides theoretical support for CO₂ sequestration and ECBM recovery.