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Effective information management is critical for the development of manufacturing processes. This paper aims to provide an overview of ontologies that can be utilized in building Industry 4.0 applications. The main contributions of the work are that it highlights ontologies that are suitable for manufacturing management and recommends the multilayer-network-based interpretation and analysis of ontology-based databases. This article not only serves as a reference for engineers and researchers on ontologies but also presents a reproducible industrial case study that describes the ontology-based model of a wire harness assembly manufacturing process.