Towards inferring nanopore sequencing ionic currents from nucleotide chemical structures

oleh: Hongxu Ding, Ioannis Anastopoulos, Andrew D. Bailey, Joshua Stuart, Benedict Paten

Format: Article
Diterbitkan: Nature Portfolio 2021-11-01

Deskripsi

Nanopore sequencing allows users to identify nucleotide sequence from ionic currents. Here, the authors use deep learning to facilitate the de novo identification of modified nucleotides, particularly methylated cytosine and guanine, from the measured ionic currents without the need for controls.