A Plasmid Carrying <i>bla</i><sub>IMP-56</sub> in <i>Pseudomonas aeruginosa</i> Belonging to a Novel Resistance Plasmid Family

oleh: Jessica Gómez-Martínez, Rosa del Carmen Rocha-Gracia, Elena Bello-López, Miguel Angel Cevallos, Miguel Castañeda-Lucio, Alma López-García, Yolanda Sáenz, Guadalupe Jiménez-Flores, Gerardo Cortés-Cortés, Patricia Lozano-Zarain

Format: Article
Diterbitkan: MDPI AG 2022-09-01

Deskripsi

<i>bla</i><sub>IMP</sub> and <i>bla</i><sub>VIM</sub> are the most detected plasmid-encoded carbapenemase genes in <i>Pseudomonas aeruginosa</i>. Previous studies have reported plasmid sequences carrying <i>bla</i><sub>IMP</sub> variants, except <i>bla</i><sub>IMP-56</sub>. In this study, we aimed to characterize a plasmid carrying <i>bla</i><sub>IMP-56</sub> in a <i>P. aeruginosa</i> strain isolated from a Mexican hospital. The whole genome of <i>P. aeruginosa</i> strain PE52 was sequenced using Illumina Miseq 2 × 150 bp, with 5 million paired-end reads. We characterized a 27 kb plasmid (pPE52IMP) that carried <i>bla</i><sub>IMP-56</sub>. The phylogenetic analysis of RepA in pPE52IMP and 33 <i>P. aeruginosa</i> plasmids carrying resistance genes reported in the GenBank revealed that pPE52IMP and four plasmids (pMATVIM-7, unnamed (FDAARGOS_570), pD5170990, and pMRVIM0713) were in the same clade. These closely related plasmids belonged to the MOB<sub>P11</sub> subfamily and had similar backbones. Another plasmid (p4130-KPC) had a similar backbone to pPE52IMP; however, its RepA was truncated. In these plasmids, the resistance genes <i>bla</i><sub>KPC-2</sub>, <i>bla</i><sub>VIM</sub> variants, <i>aac(6′)-Ib4</i>, <i>bla</i><sub>OXA</sub> variants, and <i>bla</i><sub>IMP-56</sub> were inserted between <i>phd</i> and resolvase genes. This study describes a new family of plasmids carrying resistance genes, with a similar backbone, the same RepA, and belonging to the MOB<sub>P11</sub> subfamily in <i>P. aeruginosa</i>. In addition, our characterized plasmid harboring <i>bla</i><sub>IMP-56</sub> (pPE52IMP) belongs to this family.