Generalized fiducial methods for testing quantitative trait locus effects in genetic backcross studies

oleh: Pengcheng Ren, Guanfu Liu, Xiaolong Pu, Yan Li

Format: Article
Diterbitkan: Taylor & Francis Group 2022-05-01

Deskripsi

In this paper, we propose generalized fiducial methods and construct four generalized p-values to test the existence of quantitative trait locus effects under phenotype distributions from a location-scale family. Compared with the likelihood ratio test based on simulation studies, our methods perform better at controlling type I errors while retaining comparable power in cases with small or moderate sample sizes. The four generalized fiducial methods support varied scenarios: two of them are more aggressive and powerful, whereas the other two appear more conservative and robust. A real data example involving mouse blood pressure is used to illustrate our proposed methods.