DNA fiber combing protocol using in-house reagents and coverslips to analyze replication fork dynamics in mammalian cells

oleh: Gemma Moore, Judit Jimenez Sainz, Ryan B. Jensen

Format: Article
Diterbitkan: Elsevier 2022-06-01

Deskripsi

Summary: DNA fiber combing is a versatile technique that provides insight into replication fork dynamics at single-molecule resolution. DNA fibers are bound to silanized coverslips and combed, which straightens and aligns the fibers along a single axis. Here, we present a DNA fiber combing protocol that does not use commercial kits; we detail the steps to prepare all materials, reagents, and silanized coverslips. We describe the use of DLD-1 cells, but the protocol is amenable to other cell types.