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Gene Transfer Agent <i>g5</i> Gene Reveals Bipolar and Endemic Distribution of <i>Roseobacter</i> Clade Members in Polar Coastal Seawater
oleh: Yin-Xin Zeng, Hui-Rong Li, Wei Luo
Format: | Article |
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Diterbitkan: | MDPI AG 2022-05-01 |
Deskripsi
The <i>Roseobacter</i> clade represents one of the most abundant groups of marine bacteria and plays important biogeochemical roles in marine environments. <i>Roseobacter</i> genomes commonly contain a conserved gene transfer agent (GTA) gene cluster. A major capsid protein-encoding GTA (<i>g5</i>) has been used as a genetic marker to estimate the diversity of marine roseobacters. Here, the diversity of roseobacters in the coastal seawater of Arctic Kongsfjorden and Antarctic Maxwell Bay was investigated based on <i>g5</i> gene clone library analysis. Four <i>g5</i> gene clone libraries were constructed from microbial assemblages representing Arctic and Antarctic regions. The genus <i>Phaeobacter</i> was exclusively detected in Arctic seawater, whereas the genera <i>Jannaschia</i>, <i>Litoreibacter</i> and <i>Pacificibacter</i> were only observed in Antarctic seawater. More diverse genera within the <i>Roseobacter</i> clade were observed in Antarctic clones than in Arctic clones. The genera <i>Sulfitobacter</i>, <i>Loktanella</i> and <i>Yoonia</i> were dominant (higher than 10% of total clones) in both Arctic and Antarctic samples, implying their roles in polar marine environments. The results not only indicated a bipolar or even global distribution of roseobacters in marine environments but also showed their endemic distribution either in the Arctic or Antarctic. Endemic phylotypes were more frequently observed in polar regions than cosmopolitan phylotypes. In addition, endemic phylotypes were more abundant in Arctic samples (84.8% of Arctic sequences) than in Antarctic samples (54.3% of Antarctic sequences).