Population structure analysis and laboratory monitoring of Shigella by core-genome multilocus sequence typing
oleh: Iman Yassine, Sophie Lefèvre, Elisabeth E. Hansen, Corinne Ruckly, Isabelle Carle, Monique Lejay-Collin, Laëtitia Fabre, Rayane Rafei, Dominique Clermont, Maria Pardos de la Gandara, Fouad Dabboussi, Nicholas R. Thomson, François-Xavier Weill
| Format: | Article |
|---|---|
| Diterbitkan: | Nature Portfolio 2022-01-01 |
Deskripsi
Lab-based surveillance of Shigella has traditionally been based on serotyping but increasing availability of whole genome sequencing could enable higher resolution typing. Here, the authors apply a core genome multilocus sequence typing scheme to Shigella sequence data and describe its population structure.