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Occurrence of NDM-1 and VIM-2 Co-Producing <i>Escherichia coli</i> and OprD Alteration in <i>Pseudomonas aeruginosa</i> Isolated from Hospital Environment Samples in Northwestern Tunisia
oleh: Raouaa Maaroufi, Olfa Dziri, Linda Hadjadj, Seydina M. Diene, Jean-Marc Rolain, Chedly Chouchani
Format: | Article |
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Diterbitkan: | MDPI AG 2021-09-01 |
Deskripsi
Hospital environments constitute the main reservoir of multidrug-resistant bacteria. In this study we aimed to investigate the presence of Gram-negative bacteria in one Northwestern Tunisian hospital environment, and characterize the genes involved in bacterial resistance. A total of 152 environmental isolates were collected from various surfaces and isolated using MacConkey medium supplemented with cefotaxime or imipenem, with 81 fermenter bacteria (27 <i>Escherichia coli,</i> and 54 <i>Enterobacter</i> spp., including 46 <i>Enterobacter cloacae</i>), and 71 non-fermenting bacteria (69 <i>Pseudomonas</i> spp., including 54 <i>Pseudomonas aeruginosa,</i> and 2 <i>Stenotrophomonas maltophilia</i>) being identified by the MALDI-TOF-MS method. Antibiotic susceptibility testing was performed by disk diffusion method and E-Test was used to determine MICs for imipenem. Several genes implicated in beta-lactams resistance were characterized by PCR and sequencing. Carbapenem resistance was detected among 12 isolates; nine <i>E. coli</i> (<i>bla</i><sub>NDM-1</sub> (<i>n</i> = 8); <i>bla</i><sub>NDM-1</sub> + <i>bla</i><sub>VIM-2</sub> (<i>n</i> = 1)) and three <i>P. aeruginosa</i> were carbapenem-resistant by loss of OprD porin. The whole-genome sequencing of <i>P. aeruginosa</i> 97H was determined using Illumina MiSeq sequencer, typed ST285, and harbored <i>bla</i><sub>OXA-494</sub>. Other genes were also detected, notably <i>bla</i><sub>TEM</sub> (<i>n</i> = 23), <i>bla</i><sub>CTX-M-1</sub> (<i>n</i> = 10) and <i>bla</i><sub>CTX-M-9</sub> (<i>n</i> = 6). These new epidemiological data imposed new surveillance strategies and strict hygiene rules to decrease the spread of multidrug-resistant bacteria in this area.