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High-Quality Complete Genome Resource for <i>Dickeya dadantii</i> Type Strain DSM 18020 via PacBio Sequencing
oleh: Yi Cheng, Jianping Xu, Zhiqiang Song, Wenting Li, Jiayang Li, Zhecheng Xu, Fengming Chen, Huajiao Qiu, Tuhong Wang
| Format: | Article |
|---|---|
| Diterbitkan: | MDPI AG 2024-06-01 |
Deskripsi
<i>Dickeya dadantii</i> is a common pathogen of bacterial soft rot on a wide range of plants, including several crops. In this study, we present the complete genome sequence of the <i>D. dadantii</i> type strain DSM18020<sup>T</sup>. The genome was assembled using PacBio technology, resulting in a 4,997,541 bp circular chromosome with a G+C content of 56.5%. Our sequence analyses predicted 4277 protein-encoding genes, including several associated with known bacterial virulence factors and secondary metabolites. Comparative genomics analysis between <i>Dickeya</i> revealed that the category of ‘metabolism’ is the most important in both the core and accessory genomes, while the category of ‘information storage and processing’ is the most dominant in unique genomes. These findings will not only help us to understand the pathogenic mechanisms of <i>D. dadantii</i> DSM18020<sup>T</sup>, but also provide us with useful information for new control strategies against this phytopathogen.