Molecular Epidemiology of Extensively Drug-Resistant <i>mcr</i> Encoded Colistin-Resistant Bacterial Strains Co-Expressing Multifarious β-Lactamases

oleh: Hasan Ejaz, Sonia Younas, Muhammad Usman Qamar, Kashaf Junaid, Abualgasim Elgaili Abdalla, Khalid Omer Abdalla Abosalif, Ayman Ali Mohammed Alameen, Mohammed Yagoub Mohammed Elamir, Naveed Ahmad, Sanaa Samir Mohamed Hamam, Eman Hosney Mohammed Salem, Syed Nasir Abbas Bukhari

Format: Article
Diterbitkan: MDPI AG 2021-04-01

Deskripsi

Plasmid-mediated colistin resistance (Col-R) conferred by <i>mcr</i> genes endangers the last therapeutic option for multifarious β-lactamase-producing bacteria. The current study aimed to explore the <i>mcr</i> gene molecular epidemiology in extensively drug-resistant (XDR) bacteria. Col-R gram-negative bacterial strains were screened using a minimum inhibitory concentration (MIC) breakpoint ≥4 µg/mL. Resistant isolates were examined for <i>mcr</i> variants, extended-spectrum β-lactamase, AmpC, and carbapenemase genes using polymerase chain reaction (PCR). The MIC breakpoints for <i>mcr</i>-positive strains were determined using broth microdilution and E-test strips. Overall, 19/718 (2.6%) gram-negative rods (GNRs) harboring <i>mcr</i> were identified, particularly in pus (<i>p</i> = 0.01) and tracheal secretions (<i>p</i> = 0.03). Molecular epidemiology data confirmed 18/19 (95%) <i>mcr</i>-1 and 1/19 (5%) <i>mcr</i>-2 genes. Integron detection revealed 15/17 (88%) <i>Int-1</i> and 2/17 (12%) <i>Int-2</i>. Common co-expressing drug-resistant β-lactamase genes included 8/16 (50%) <i>bla</i><sub>CTM-1</sub>, 3/16 (19%) <i>bla</i><sub>CTM-15</sub>, 3/3 (100%) <i>bla</i><sub>CMY-2</sub>, 2/8 (25%) <i>bla</i><sub>NDM-1</sub>, and 2/8 (25%) <i>bla</i><sub>NDM-5</sub>. The MIC<sub>50</sub> and MIC<sub>90</sub> values (µg/mL) were as follows: <i>Escherichia coli</i>, 12 and 24; <i>Klebsiella pneumoniae</i>, 12 and 32; <i>Acinetobacter baumannii</i>, 8 and 12; and <i>Pseudomonas aeruginosa</i>, 32 and 64, respectively. Treatment of XDR strains has become challenging owing to the co-expression of <i>mcr</i>-1, <i>mcr</i>-2, multifarious β-lactamase genes, and integrons.