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Russian permafrost regions are unparalleled in extent, history of development, population presence, and the scale of economic activities. This special issue, «Permafrost Regions in Transition», provides a timely opportunity to (a) examine major issues associated with changing permafrost conditions in natural environments and areas of economic development; (b) present insights into new methods of permafrost investigations; and (c) describe new opportunities and risks threatening sustainable development of Arctic populations and industrial centers in Russia. The issue begins with papers focused on methods of permafrost research, followed by papers focused on examining changes in permafrost under natural conditions, and in Arctic settlements. The last two papers examine potential impacts of permafrost degradation on the Russian economy and potential health implications.