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Development of an early alert model for pandemic situations in Germany
oleh: Danqi Wang, Manuel Lentzen, Jonas Botz, Diego Valderrama, Lucille Deplante, Jules Perrio, Marie Génin, Edward Thommes, Laurent Coudeville, Holger Fröhlich
Format: | Article |
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Diterbitkan: | Nature Portfolio 2023-11-01 |
Deskripsi
Abstract The COVID-19 pandemic has pointed out the need for new technical approaches to increase the preparedness of healthcare systems. One important measure is to develop innovative early warning systems. Along those lines, we first compiled a corpus of relevant COVID-19 related symptoms with the help of a disease ontology, text mining and statistical analysis. Subsequently, we applied statistical and machine learning (ML) techniques to time series data of symptom related Google searches and tweets spanning the time period from March 2020 to June 2022. In conclusion, we found that a long-short-term memory (LSTM) jointly trained on COVID-19 symptoms related Google Trends and Twitter data was able to accurately forecast up-trends in classical surveillance data (confirmed cases and hospitalization rates) 14 days ahead. In both cases, F1 scores were above 98% and 97%, respectively, hence demonstrating the potential of using digital traces for building an early alert system for pandemics in Germany.