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In this paper, an advanced solution for measuring heat flow through opaque building elements is presented. The solution is based on the implementation of a computer-aided technique for continuous monitoring of heat flow sensor performance and silent checking of their accuracy. In principle, the technique provides an ex-post compensation of potential deviations and inaccuracies detected during the measurement, which can be done without interfering with the ongoing experiment. As a consequence, traditional ‘non-smart’ sensors can be turned into advanced sensors with self-sensing or self-adjustment features at nearly zero additional costs. The high efficiency of the proposed approach was validated against experimental data obtained from an independent set of advanced high-sensitive sensors. Considering the validation results, the proposed technique brings an entirely new potential for maintenance-free applications for thermal performance monitoring in the building sector, typically for long-term experiments or measurements under dynamic environments.