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<i>Trechispora</i> are an important genus of wood-inhabiting fungi that have the ability to decompose rotten wood in the forest ecosystem. In this study, we reported three new species of <i>Trechispora</i>: <i>T. murina</i>, <i>T. odontioidea</i>, <i>T. olivacea</i> from a subtropical region of Yunnan Province, China. Species descriptions were based on a combination of morphological features and phylogenetic analyses of the ITS and LSU region of nuclear ribosomal DNA. <i>Trechispora murina</i> is characterized by the resupinate basidiomata, grandinioid hymenial surface with a greyish tint, monomitic hyphal system and ellipsoid, thick-walled, ornamented basidiospores; <i>T. odontioidea</i> has an odontioid hymenial surface with cylindrical to conical, blunt aculei and subglobose to globose, colorless, slightly thick-walled, ornamented basidiospores; <i>T. olivacea</i> has a farinaceous hymenial surface with olivaceous tint, basidia clavate and thick-walled, ornamented, broadly ellipsoid to globose basidiospores. Sequences of the ITS and nLSU rDNA markers of the studied samples were generated, and phylogenetic analyses were performed with maximum likelihood, maximum parsimony, and Bayesian inference methods. After a series of phylogenetic analyses, the 5.8S+nLSU dataset was constructed to test the phylogenetic relationship of <i>Trechispora</i> with other genera of Hydnodontaceae. The ITS dataset was used to evaluate the phylogenetic relationship of the three new species with other species of <i>Trechispora</i>. Using ITS phylogeny, the new species <i>T. murina</i> was retrieved as a sister to <i>T. bambusicola</i> with moderate supports; <i>T. odontioidea</i> formed a single lineage and then grouped with <i>T. fimbriata</i> and <i>T. nivea</i>; while <i>T. olivacea</i> formed a monophyletic lineage with <i>T. farinacea</i>, <i>T. hondurensis,</i> and <i>T. mollis</i>.