Identifying transposable element expression dynamics and heterogeneity during development at the single-cell level with a processing pipeline scTE

oleh: Jiangping He, Isaac A. Babarinde, Li Sun, Shuyang Xu, Ruhai Chen, Junjie Shi, Yuanjie Wei, Yuhao Li, Gang Ma, Qiang Zhuang, Andrew P. Hutchins, Jiekai Chen

Format: Article
Diterbitkan: Nature Portfolio 2021-03-01

Deskripsi

How transposable elements (TE) contribute to cell fate changes is unclear. Here, the authors generate a pipeline to quantify TE expression from single cell data. They show the dynamic expression of TEs from gastrulation to somatic cell reprogramming and human disease