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Antibiotic Resistance in Shiga Toxigenic <i>Escherichia coli</i> Isolates from Surface Waters and Sediments in a Mixed Use Urban Agricultural Landscape
oleh: Yvonne Ma, Jessica Chen, Karen Fong, Stephanie Nadya, Kevin Allen, Chad Laing, Kim Ziebell, Ed Topp, Laura M. Carroll, Martin Wiedmann, Pascal Delaquis, Siyun Wang
Format: | Article |
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Diterbitkan: | MDPI AG 2021-02-01 |
Deskripsi
Antibiotic resistance (AR) phenotypes and acquired resistance determinants (ARDs) detected by in silico analysis of genome sequences were examined in 55 Shiga toxin-producing <i>Escherichia coli</i> (STEC) isolates representing diverse serotypes recovered from surfaces waters and sediments in a mixed use urban/agricultural landscape in British Columbia, Canada. The isolates displayed decreased susceptibility to florfenicol (65.5%), chloramphenicol (7.3%), tetracycline (52.7%), ampicillin (49.1%), streptomycin (34.5%), kanamycin (20.0%), gentamycin (10.9%), amikacin (1.8%), amoxicillin/clavulanic acid (21.8%), ceftiofur (18.2%), ceftriaxone (3.6%), trimethoprim-sulfamethoxazole (12.7%), and cefoxitin (3.6%). All surface water and sediment isolates were susceptible to ciprofloxacin, nalidixic acid, ertapenem, imipenem and meropenem. Eight isolates (14.6%) were multidrug resistant. ARDs conferring resistance to phenicols (<i>floR</i>), trimethoprim (<i>dfrA</i>), sulfonamides (<i>sul1/2</i>), tetracyclines (<i>tetA/B</i>), and aminoglycosides (<i>aadA</i> and <i>aph</i>) were detected. Additionally, narrow-spectrum β-lactamase <i>bla</i>TEM-1b and extended-spectrum AmpC β-lactamase (cephalosporinase) <i>bla</i>CMY-2 were detected in the genomes, as were replicons from plasmid incompatibility groups IncFII, IncB/O/K/Z, IncQ1, IncX1, IncY and Col156. A comparison with surveillance data revealed that AR phenotypes and ARDs were comparable to those reported in generic <i>E. coli</i> from food animals. Aquatic environments in the region are potential reservoirs for the maintenance and transmission of antibiotic resistant STEC, associated ARDs and their plasmids.