Characterization and genome analysis of Vibrio phage vB_VhaP_PG11, representing a new viral genus

oleh: Yajun Jing, Yajun Jing, Ruizhe Guo, Ruizhe Guo, Hongmin Wang, Hongmin Wang, Yantao Liang, Yantao Liang, Yantao Liang, Yundan Liu, Yundan Liu, Yifei Feng, Qin Ma, Hongbing Shao, Hongbing Shao, Hongbing Shao, Yeong Yik Sung, Yeong Yik Sung, Wen Jye Mok, Wen Jye Mok, Li Lian Wong, Li Lian Wong, Yu-Zhong Zhang, Yu-Zhong Zhang, Andrew McMinn, Andrew McMinn, Andrew McMinn, Min Wang, Min Wang, Min Wang, Min Wang, Min Wang, Jinyan Xing

Format: Article
Diterbitkan: Frontiers Media S.A. 2023-01-01

Deskripsi

Vibrio is a kind of common gram-negative bacteria, which is widely distributed in marine and estuarine environments. In the study, a novel marine phage vB_VhaP_PG11, infecting Vibrio hangzhouensis, was isolated from the offshore waters of Qingdao, China. vB_VhaP_PG11 is a double-stranded DNA phage. The whole genome proteomic tree shows that vB_VhaP_PG11 phage is related to two Vibrio phages, Vibrio phage 1.238.A._10N.261.52.F10 and Vibrio phage 1.245.O._10N.261.54.C7, but with low homology. Their amino acids identity with vB_VhaP_PG11 is 42.77 and 41.49% respectively. The prediction results of genome-blast distance phylogeny (GBDP) and the analysis gene-sharing network indicate that vB_VhaP_PG11 belongs to a new genus in Schitoviridae, named Qingschitovirus. The study of Vibrio phage vB_VhaP_PG11 provides basic information contributing to a better understanding of interactions between Vibrio phages and their hosts and helps analyze unknown viral sequences in the metagenomic database.