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Observations of CO₂ were made in the upper troposphere and lower stratosphere in the deep tropics in order to determine the patterns of large-scale vertical transport and age of air in the Tropical Tropopause Layer (TTL). Flights aboard the NASA WB-57F aircraft over Central America and adjacent ocean areas took place in January and February, 2004 (Pre-AURA Validation Experiment, Pre-AVE) and 2006 (Costa Rice AVE, CR-AVE), and for the same flight dates of 2006, aboard the Proteus aircraft from the surface to 15 km over Darwin, Australia (Tropical Warm Pool International Cloud Experiment, TWP-ICE). The data demonstrate that the TTL is composed of two layers with distinctive features: (1) <i>the lower TTL</i>, 350&ndash;360 K (potential temperature(&theta;); approximately 12&ndash;14 km), is subject to inputs of convective outflows, as indicated by layers of variable CO₂ concentrations, with air parcels of zero age distributed throughout the layer; (2) <i>the upper TTL</i>, from &theta;=~360 K to ~390 K (14&ndash;18 km), ascends slowly and ages uniformly, as shown by a linear decline in CO₂ mixing ratio tightly correlated with altitude, associated with increasing age. This division is confirmed by ensemble trajectory analysis. The CO₂ concentration at the level of 360 K was 380.0(&plusmn;0.2) ppmv, indistinguishable from surface site values in the Intertropical Convergence Zone (ITCZ) for the flight dates. Values declined with altitude to 379.2(&plusmn;0.2) ppmv at 390 K, implying that air in the upper TTL monotonically ages while ascending. In combination with the winter slope of the CO₂ seasonal cycle (+10.8&plusmn;0.4 ppmv/yr), the vertical gradient of &ndash;0.78 (&plusmn;0.09) ppmv gives a mean age of 26(&plusmn;3) days for the air at 390 K and a mean ascent rate of 1.5(&plusmn;0.3) mm s^&minus;1. The TTL near 360 K in the Southern Hemisphere over Australia is very close in CO₂ composition to the TTL in the Northern Hemisphere over Costa Rica, with strong contrasts emerging at lower altitudes (&lt;360 K). Both Pre-AVE and CR-AVE CO₂ observed unexpected input from deep convection over Amazônia deep into the TTL. The CO₂ data confirm the operation of a highly accurate tracer clock in the TTL that provides a direct measure of the ascent rate of the TTL and of the age of air entering the stratosphere.