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A silica-bound <i>C</i>-butylpyrogallol[4]arene chromatographic stationary phase was prepared and characterised by thermogravimetric analysis, scanning electron microscopy, NMR and mass spectrometry. The chromatographic performance was investigated by using C₆₀ and C₇₀ fullerenes in reverse phase mode via flash column and high-pressure liquid chromatography (HPLC). The resulting new stationary phase was observed to demonstrate size-selective molecular recognition as postulated from our in-silico studies. The silica-bound <i>C</i>-butylpyrogallol[4]arene flash and HPLC stationary phases were able to separate a C₆₀- and C₇₀-fullerene mixture more effectively than an RP-C₁₈ stationary phase. The presence of toluene in the mobile phase plays a significant role in achieving symmetrical peaks in flash column chromatography.