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In frequency-hopping spread-spectrum (FHSS) systems, jammer detection and mitigation are important but difficult. Each slot of the FHSS experiences frequency-selective fading and unequal transceiver-frequency gains that hinder the detection of jammed slots and result in a poor bit-error rate (BER). To increase BER performance, we first propose a noise-jammer power estimator (NJPE) that estimates noise and jammer powers regardless of different channel gains, and derived its normalized Cramér−Rao bound (NCRB). Second, we developed a jammer detector based on gamma distribution, and designed a restoration method combining all nonjammed slots. Computer simulations verified the derived NCRB of the proposed NJPE by normalized mean squared error (NMSE), and showed that the jammer-detection probability of the proposed jammer detector was better than that of conventional detectors. The BER performance of the proposed method was also shown to be better than that of conventional methods.