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In this study, Stenothyra glabra belonging to the truncatelloid family Stenothyridae is redescribed using morphological characters from the shell, operculum, and radula. The species is distinguished from other species in the group by its shell without spotted spiral lines and by its dome-shaped, mostly smooth, protoconch with some pits. Together with the morphological description, the complete mitogenome for the species is provided, which fill a knowledge gap in Stenothyridae. The mitogenome of S. glabra is 15,830 bp in length and has a circular structure. It contains 37 genes: 22 transfer RNA genes (tRNAs), two ribosomal RNA genes (rRNAs), and 13 protein-encoding genes (PCGs). The overall A+T content of the mitogenome is 68.9%. Molecular phylogenetic analysis and COI sequence divergence separate S. glabra from its congeners and show that S. glabra and S. cf. divalis form a sister clade.