Pan-genome inversion index reveals evolutionary insights into the subpopulation structure of Asian rice

oleh: Yong Zhou, Zhichao Yu, Dmytro Chebotarov, Kapeel Chougule, Zhenyuan Lu, Luis F. Rivera, Nagarajan Kathiresan, Noor Al-Bader, Nahed Mohammed, Aseel Alsantely, Saule Mussurova, João Santos, Manjula Thimma, Maxim Troukhan, Alice Fornasiero, Carl D. Green, Dario Copetti, David Kudrna, Victor Llaca, Mathias Lorieux, Andrea Zuccolo, Doreen Ware, Kenneth McNally, Jianwei Zhang, Rod A. Wing

Format: Article
Diterbitkan: Nature Portfolio 2023-03-01

Deskripsi

Pan-genomes provide useful resources for evolutionary studies, functional genomics and breeding of cultivated plants. Here, the authors report a new rice pan-genome including 73 Asian rice and two wild relatives (Oryza rufipogon and O. punctata), and reveal the prevalence and scale of large inversions across the pan-genome.