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A Propidium Monoazide (PMAxx)-Droplet Digital PCR (ddPCR) for the Detection of Viable <i>Burkholderia cepacia</i> Complex in Nuclease-Free Water and Antiseptics
oleh: Soumana Daddy Gaoh, Ohgew Kweon, Yong-Jin Lee, David Hussong, Bernard Marasa, Youngbeom Ahn
Format: | Article |
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Diterbitkan: | MDPI AG 2022-04-01 |
Deskripsi
Pharmaceutical products contaminated with <i>Burkholderia cepacia</i> complex (BCC) strains constitute a serious health issue for susceptible individuals. New detection methods to distinguish DNA from viable cells are required to ensure pharmaceutical product quality and safety. In this study, we have assessed a droplet digital PCR (ddPCR) with a variant propidium monoazide (PMAxx) for selective detection of live/dead BCC cells in autoclaved nuclease-free water after 365 days, in 0.001% chlorhexidine gluconate (CHX), and in 0.005% benzalkonium chloride (BZK) solutions after 184 days. Using 10 μM PMAxx and 5 min light exposure, a proportion of dead BCC was quantified by ddPCR. The detection limit of culture-based method was 10<sup>4</sup> CFU/mL, equivalent to 9.7 pg/μL for <i>B. cenocepacia</i> J2315, while that of ddPCR was 9.7 fg/μL. The true positive rate from nuclease-free water and CHX using PMAxx-ddPCR assay was 60.0% and 38.3%, respectively, compared to 85.0% and 74.6% without PMAxx (<i>p</i> < 0.05), respectively. However, in BZK-treated cells, no difference in the detection rate was observed between the ddPCR assay on samples treated with PMAxx (67.1%) and without PMAxx (63.3%). This study shows that the PMAxx-ddPCR assay provides a better tool for selective detection of live BCC cells in non-sterile pharmaceutical products.