Hasil Pencarian - Ying Hefner

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  1. 1
    Global pathogenomic analysis identifies known and candidate genetic antimicrobial resistance determinants in twelve species

    Global pathogenomic analysis identifies known and candidate genetic antimicrobial resistance determinants in twelve species oleh Jason C. Hyun, Jonathan M. Monk, Richard Szubin, Ying Hefner, Bernhard O. Palsson

    Diterbitkan 2023-11-01
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  2. 2
    Coordination of CcpA and CodY Regulators in Staphylococcus aureus USA300 Strains

    Coordination of CcpA and CodY Regulators in Staphylococcus aureus USA300 Strains oleh Saugat Poudel, Ying Hefner, Richard Szubin, Anand Sastry, Ye Gao, Victor Nizet, Bernhard O. Palsson

    Diterbitkan 2022-12-01
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  3. 3
    The hallmarks of a tradeoff in transcriptomes that balances stress and growth functions

    The hallmarks of a tradeoff in transcriptomes that balances stress and growth functions oleh Christopher Dalldorf, Kevin Rychel, Richard Szubin, Ying Hefner, Arjun Patel, Daniel C. Zielinski, Bernhard O. Palsson

    Diterbitkan 2024-07-01
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  4. 4
    Evolution of gene knockout strains of E. coli reveal regulatory architectures governed by metabolism

    Evolution of gene knockout strains of E. coli reveal regulatory architectures governed by metabolism oleh Douglas McCloskey, Sibei Xu, Troy E. Sandberg, Elizabeth Brunk, Ying Hefner, Richard Szubin, Adam M. Feist, Bernhard O. Palsson

    Diterbitkan 2018-09-01
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  5. 5
    Identification of a transcription factor, PunR, that regulates the purine and purine nucleoside transporter punC in E. coli

    Identification of a transcription factor, PunR, that regulates the purine and purine nucleoside transporter punC in E. coli oleh Irina A. Rodionova, Ye Gao, Anand Sastry, Ying Hefner, Hyun Gyu Lim, Dmitry A. Rodionov, Milton H. Saier, Bernhard O. Palsson

    Diterbitkan 2021-08-01
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  6. 6
    Machine Learning of Bacterial Transcriptomes Reveals Responses Underlying Differential Antibiotic Susceptibility

    Machine Learning of Bacterial Transcriptomes Reveals Responses Underlying Differential Antibiotic Susceptibility oleh Anand V. Sastry, Nicholas Dillon, Amitesh Anand, Saugat Poudel, Ying Hefner, Sibei Xu, Richard Szubin, Adam M. Feist, Victor Nizet, Bernhard Palsson

    Diterbitkan 2021-08-01
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  7. 7
    Proteome allocation is linked to transcriptional regulation through a modularized transcriptome

    Proteome allocation is linked to transcriptional regulation through a modularized transcriptome oleh Arjun Patel, Dominic McGrosso, Ying Hefner, Anaamika Campeau, Anand V. Sastry, Svetlana Maurya, Kevin Rychel, David J. Gonzalez, Bernhard O. Palsson

    Diterbitkan 2024-06-01
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  8. 8
    Laboratory evolution of synthetic electron transport system variants reveals a larger metabolic respiratory system and its plasticity

    Laboratory evolution of synthetic electron transport system variants reveals a larger metabolic respiratory system and its plasticity oleh Amitesh Anand, Arjun Patel, Ke Chen, Connor A. Olson, Patrick V. Phaneuf, Cameron Lamoureux, Ying Hefner, Richard Szubin, Adam M. Feist, Bernhard O. Palsson

    Diterbitkan 2022-06-01
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  9. 9
    The Escherichia coli transcriptome mostly consists of independently regulated modules

    The Escherichia coli transcriptome mostly consists of independently regulated modules oleh Anand V. Sastry, Ye Gao, Richard Szubin, Ying Hefner, Sibei Xu, Donghyuk Kim, Kumari Sonal Choudhary, Laurence Yang, Zachary A. King, Bernhard O. Palsson

    Diterbitkan 2019-12-01
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  10. 10
    Reconstructing the transcriptional regulatory network of probiotic L. reuteri is enabled by transcriptomics and machine learning

    Reconstructing the transcriptional regulatory network of probiotic L. reuteri is enabled by transcriptomics and machine learning oleh Jonathan Josephs-Spaulding, Akanksha Rajput, Ying Hefner, Richard Szubin, Archana Balasubramanian, Gaoyuan Li, Daniel C. Zielinski, Leonie Jahn, Morten Sommer, Patrick Phaneuf, Bernhard O. Palsson

    Diterbitkan 2024-03-01
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  11. 11
    Environmental conditions dictate differential evolution of vancomycin resistance in Staphylococcus aureus

    Environmental conditions dictate differential evolution of vancomycin resistance in Staphylococcus aureus oleh Henrique Machado, Yara Seif, George Sakoulas, Connor A. Olson, Ying Hefner, Amitesh Anand, Ying Z. Jones, Richard Szubin, Bernhard O. Palsson, Victor Nizet, Adam M. Feist

    Diterbitkan 2021-06-01
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  12. 12
    A systems approach discovers the role and characteristics of seven LysR type transcription factors in Escherichia coli

    A systems approach discovers the role and characteristics of seven LysR type transcription factors in Escherichia coli oleh Irina A. Rodionova, Ye Gao, Jonathan Monk, Ying Hefner, Nicholas Wong, Richard Szubin, Hyun Gyu Lim, Dmitry A. Rodionov, Zhongge Zhang, Milton H. Saier, Bernhard O. Palsson

    Diterbitkan 2022-05-01
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  13. 13
    Growth Adaptation of gnd and sdhCB Escherichia coli Deletion Strains Diverges From a Similar Initial Perturbation of the Transcriptome

    Growth Adaptation of gnd and sdhCB Escherichia coli Deletion Strains Diverges From a Similar Initial Perturbation of the Transcriptome oleh Douglas McCloskey, Douglas McCloskey, Sibei Xu, Troy E. Sandberg, Elizabeth Brunk, Ying Hefner, Richard Szubin, Adam M. Feist, Adam M. Feist, Bernhard O. Palsson, Bernhard O. Palsson

    Diterbitkan 2018-08-01
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  14. 14
    The genetic basis for adaptation of model-designed syntrophic co-cultures.

    The genetic basis for adaptation of model-designed syntrophic co-cultures. oleh Colton J Lloyd, Zachary A King, Troy E Sandberg, Ying Hefner, Connor A Olson, Patrick V Phaneuf, Edward J O'Brien, Jon G Sanders, Rodolfo A Salido, Karenina Sanders, Caitriona Brennan, Gregory Humphrey, Rob Knight, Adam M Feist

    Diterbitkan 2019-03-01
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  15. 15
    Enzyme promiscuity shapes adaptation to novel growth substrates

    Enzyme promiscuity shapes adaptation to novel growth substrates oleh Gabriela I Guzmán, Troy E Sandberg, Ryan A LaCroix, Ákos Nyerges, Henrietta Papp, Markus de Raad, Zachary A King, Ying Hefner, Trent R Northen, Richard A Notebaart, Csaba Pál, Bernhard O Palsson, Balázs Papp, Adam M Feist

    Diterbitkan 2019-04-01
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  16. 16
    Laboratory evolution, transcriptomics, and modeling reveal mechanisms of paraquat tolerance

    Laboratory evolution, transcriptomics, and modeling reveal mechanisms of paraquat tolerance oleh Kevin Rychel, Justin Tan, Arjun Patel, Cameron Lamoureux, Ying Hefner, Richard Szubin, Josefin Johnsen, Elsayed Tharwat Tolba Mohamed, Patrick V. Phaneuf, Amitesh Anand, Connor A. Olson, Joon Ho Park, Anand V. Sastry, Laurence Yang, Adam M. Feist, Bernhard O. Palsson

    Diterbitkan 2023-09-01
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