Search Results - Todd Z. DeSantis

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  1. 1
    New perspectives on microbial community distortion after whole-genome amplification.

    New perspectives on microbial community distortion after whole-genome amplification. by Alexander J Probst, Thomas Weinmaier, Todd Z DeSantis, Jorge W Santo Domingo, Nicholas Ashbolt

    Published 2015-01-01
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  2. 2
    Comparing bacterial community composition of healthy and dark spot-affected Siderastrea siderea in Florida and the Caribbean.

    Comparing bacterial community composition of healthy and dark spot-affected Siderastrea siderea in Florida and the Caribbean. by Christina A Kellogg, Yvette M Piceno, Lauren M Tom, Todd Z DeSantis, Michael A Gray, Gary L Andersen

    Published 2014-01-01
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  3. 3
    Piphillin: Improved Prediction of Metagenomic Content by Direct Inference from Human Microbiomes.

    Piphillin: Improved Prediction of Metagenomic Content by Direct Inference from Human Microbiomes. by Shoko Iwai, Thomas Weinmaier, Brian L Schmidt, Donna G Albertson, Neil J Poloso, Karim Dabbagh, Todd Z DeSantis

    Published 2016-01-01
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  4. 4
    StrainSelect: A novel microbiome reference database that disambiguates all bacterial strains, genome assemblies and extant cultures worldwide

    StrainSelect: A novel microbiome reference database that disambiguates all bacterial strains, genome assemblies and extant cultures worldwide by Todd Z. DeSantis, Cesar Cardona, Nicole R. Narayan, Satish Viswanatham, Divya Ravichandar, Brendan Wee, Cheryl-Emiliane Chow, Shoko Iwai

    Published 2023-02-01
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  5. 5
    Piphillin predicts metagenomic composition and dynamics from DADA2-corrected 16S rDNA sequences

    Piphillin predicts metagenomic composition and dynamics from DADA2-corrected 16S rDNA sequences by Nicole R. Narayan, Thomas Weinmaier, Emilio J. Laserna-Mendieta, Marcus J. Claesson, Fergus Shanahan, Karim Dabbagh, Shoko Iwai, Todd Z. DeSantis

    Published 2020-01-01
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  6. 6
    Correction to: Piphillin predicts metagenomic composition and dynamics from DADA2- corrected 16S rDNA sequences

    Correction to: Piphillin predicts metagenomic composition and dynamics from DADA2- corrected 16S rDNA sequences by Nicole R. Narayan, Thomas Weinmaier, Emilio J. Laserna-Mendieta, Marcus J. Claesson, Fergus Shanahan, Karim Dabbagh, Shoko Iwai, Todd Z. DeSantis

    Published 2020-01-01
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  7. 7
    Comparing bacterial community composition between healthy and white plague-like disease states in Orbicella annularis using PhyloChip™ G3 microarrays.

    Comparing bacterial community composition between healthy and white plague-like disease states in Orbicella annularis using PhyloChip™ G3 microarrays. by Christina A Kellogg, Yvette M Piceno, Lauren M Tom, Todd Z DeSantis, Michael A Gray, David G Zawada, Gary L Andersen

    Published 2013-01-01
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  8. 8
    Topic modeling for multi-omic integration in the human gut microbiome and implications for Autism

    Topic modeling for multi-omic integration in the human gut microbiome and implications for Autism by Christine Tataru, Marie Peras, Erica Rutherford, Kaiti Dunlap, Xiaochen Yin, Brianna S. Chrisman, Todd Z. DeSantis, Dennis P. Wall, Shoko Iwai, Maude M. David

    Published 2023-07-01
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  9. 9
    Truffle brûlés have an impact on the diversity of soil bacterial communities.

    Truffle brûlés have an impact on the diversity of soil bacterial communities. by Antonietta Mello, Guo-Chun Ding, Yvette M Piceno, Chiara Napoli, Lauren M Tom, Todd Z DeSantis, Gary L Andersen, Kornelia Smalla, Paola Bonfante

    Published 2013-01-01
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  10. 10
    A Comparative Evaluation of Tools to Predict Metabolite Profiles From Microbiome Sequencing Data

    A Comparative Evaluation of Tools to Predict Metabolite Profiles From Microbiome Sequencing Data by Xiaochen Yin, Tomer Altman, Erica Rutherford, Kiana A. West, Yonggan Wu, Jinlyung Choi, Paul L. Beck, Gilaad G. Kaplan, Karim Dabbagh, Todd Z. DeSantis, Shoko Iwai

    Published 2020-12-01
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  11. 11
    Improved detection of disease-associated gut microbes using 16S sequence-based biomarkers

    Improved detection of disease-associated gut microbes using 16S sequence-based biomarkers by Brianna S. Chrisman, Kelley M. Paskov, Nate Stockham, Jae-Yoon Jung, Maya Varma, Peter Y. Washington, Christine Tataru, Shoko Iwai, Todd Z. DeSantis, Maude David, Dennis P. Wall

    Published 2021-10-01
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  12. 12
    Characterization of coastal urban watershed bacterial communities leads to alternative community-based indicators.

    Characterization of coastal urban watershed bacterial communities leads to alternative community-based indicators. by Cindy H Wu, Bram Sercu, Laurie C Van de Werfhorst, Jakk Wong, Todd Z DeSantis, Eoin L Brodie, Terry C Hazen, Patricia A Holden, Gary L Andersen

    Published 2010-01-01
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  13. 13
    The "most wanted" taxa from the human microbiome for whole genome sequencing.

    The "most wanted" taxa from the human microbiome for whole genome sequencing. by Anthony A Fodor, Todd Z DeSantis, Kristine M Wylie, Jonathan H Badger, Yuzhen Ye, Theresa Hepburn, Ping Hu, Erica Sodergren, Konstantinos Liolios, Heather Huot-Creasy, Bruce W Birren, Ashlee M Earl

    Published 2012-01-01
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  14. 14
    Strain level and comprehensive microbiome analysis in inflammatory bowel disease via multi-technology meta-analysis identifies key bacterial influencers of disease

    Strain level and comprehensive microbiome analysis in inflammatory bowel disease via multi-technology meta-analysis identifies key bacterial influencers of disease by Jayamary Divya Ravichandar, Erica Rutherford, Cheryl-Emiliane T. Chow, Andrew Han, Mitsuko Lynn Yamamoto, Nicole Narayan, Gilaad G. Kaplan, Paul L. Beck, Marcus J. Claesson, Karim Dabbagh, Shoko Iwai, Todd Z. DeSantis

    Published 2022-10-01
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  15. 15
    Coupling genetic and chemical microbiome profiling reveals heterogeneity of archaeome and bacteriome in subsurface biofilms that are dominated by the same archaeal species.

    Coupling genetic and chemical microbiome profiling reveals heterogeneity of archaeome and bacteriome in subsurface biofilms that are dominated by the same archaeal species. by Alexander J Probst, Giovanni Birarda, Hoi-Ying N Holman, Todd Z DeSantis, Gerhard Wanner, Gary L Andersen, Alexandra K Perras, Sandra Meck, Jörg Völkel, Hans A Bechtel, Reinhard Wirth, Christine Moissl-Eichinger

    Published 2014-01-01
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  16. 16
    Multi-angle meta-analysis of the gut microbiome in Autism Spectrum Disorder: a step toward understanding patient subgroups

    Multi-angle meta-analysis of the gut microbiome in Autism Spectrum Disorder: a step toward understanding patient subgroups by Kiana A. West, Xiaochen Yin, Erica M. Rutherford, Brendan Wee, Jinlyung Choi, Brianna S. Chrisman, Kaiti L. Dunlap, Roberta L. Hannibal, Wiputra Hartono, Michelle Lin, Edward Raack, Kayleen Sabino, Yonggan Wu, Dennis P. Wall, Maude M. David, Karim Dabbagh, Todd Z. DeSantis, Shoko Iwai

    Published 2022-10-01
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