Hasil Pencarian - Shibu Yooseph

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  1. 1
    GRASP2: fast and memory-efficient gene-centric assembly and homolog search for metagenomic sequencing data

    GRASP2: fast and memory-efficient gene-centric assembly and homolog search for metagenomic sequencing data oleh Cuncong Zhong, Youngik Yang, Shibu Yooseph

    Diterbitkan 2019-06-01
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  2. 2
    Bacterial community structure alterations within the colorectal cancer gut microbiome

    Bacterial community structure alterations within the colorectal cancer gut microbiome oleh Mark Loftus, Sayf Al-Deen Hassouneh, Shibu Yooseph

    Diterbitkan 2021-03-01
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  3. 3
    Linking Inflammatory Bowel Disease Symptoms to Changes in the Gut Microbiome Structure and Function

    Linking Inflammatory Bowel Disease Symptoms to Changes in the Gut Microbiome Structure and Function oleh Sayf Al-Deen Hassouneh, Mark Loftus, Shibu Yooseph

    Diterbitkan 2021-07-01
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  4. 4
    Bacterial associations in the healthy human gut microbiome across populations

    Bacterial associations in the healthy human gut microbiome across populations oleh Mark Loftus, Sayf Al-Deen Hassouneh, Shibu Yooseph

    Diterbitkan 2021-02-01
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  5. 5
    Analyses of the microbial diversity across the human microbiome.

    Analyses of the microbial diversity across the human microbiome. oleh Kelvin Li, Monika Bihan, Shibu Yooseph, Barbara A Methé

    Diterbitkan 2012-01-01
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  6. 6
    Effect of 13-Hydroperoxyoctadecadienoic Acid (13-HPODE) Treatment on the Transcriptomic Profile of Poorly-Differentiated Caco-2 Cells

    Effect of 13-Hydroperoxyoctadecadienoic Acid (13-HPODE) Treatment on the Transcriptomic Profile of Poorly-Differentiated Caco-2 Cells oleh Nisreen Faizo, Chandrakala Aluganti Narasimhulu, Anna Forsman, Shibu Yooseph, Sampath Parthasarathy

    Diterbitkan 2021-03-01
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  7. 7
    Peroxidized Linoleic Acid, 13-HPODE, Alters Gene Expression Profile in Intestinal Epithelial Cells

    Peroxidized Linoleic Acid, 13-HPODE, Alters Gene Expression Profile in Intestinal Epithelial Cells oleh Nisreen Faizo, Chandrakala Aluganti Narasimhulu, Anna Forsman, Shibu Yooseph, Sampath Parthasarathy

    Diterbitkan 2021-02-01
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  8. 8
    Metagenome and Metatranscriptome Analyses Using Protein Family Profiles.

    Metagenome and Metatranscriptome Analyses Using Protein Family Profiles. oleh Cuncong Zhong, Anna Edlund, Youngik Yang, Jeffrey S McLean, Shibu Yooseph

    Diterbitkan 2016-07-01
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  9. 9
    A case study for large-scale human microbiome analysis using JCVI's metagenomics reports (METAREP).

    A case study for large-scale human microbiome analysis using JCVI's metagenomics reports (METAREP). oleh Johannes Goll, Mathangi Thiagarajan, Sahar Abubucker, Curtis Huttenhower, Shibu Yooseph, Barbara A Methé

    Diterbitkan 2012-01-01
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  10. 10
    Uncovering complex microbiome activities via metatranscriptomics during 24 hours of oral biofilm assembly and maturation

    Uncovering complex microbiome activities via metatranscriptomics during 24 hours of oral biofilm assembly and maturation oleh Anna Edlund, Youngik Yang, Shibu Yooseph, Xuesong He, Wenyuan Shi, Jeffrey S. McLean

    Diterbitkan 2018-12-01
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  11. 11
    Identification of Nasal Gammaproteobacteria with Potent Activity against Staphylococcus aureus: Novel Insights into the “Noncarrier” State

    Identification of Nasal Gammaproteobacteria with Potent Activity against Staphylococcus aureus: Novel Insights into the “Noncarrier” State oleh Amy L. Cole, Meera Sundar, Ana Lopez, Anna Forsman, Shibu Yooseph, Alexander M. Cole

    Diterbitkan 2021-02-01
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  12. 12
    Utilization of defined microbial communities enables effective evaluation of meta-genomic assemblies

    Utilization of defined microbial communities enables effective evaluation of meta-genomic assemblies oleh William W. Greenwald, Niels Klitgord, Victor Seguritan, Shibu Yooseph, J. Craig Venter, Chad Garner, Karen E. Nelson, Weizhong Li

    Diterbitkan 2017-04-01
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  13. 13
    Stalking the fourth domain in metagenomic data: searching for, discovering, and interpreting novel, deep branches in marker gene phylogenetic trees.

    Stalking the fourth domain in metagenomic data: searching for, discovering, and interpreting novel, deep branches in marker gene phylogenetic trees. oleh Dongying Wu, Martin Wu, Aaron Halpern, Douglas B Rusch, Shibu Yooseph, Marvin Frazier, J Craig Venter, Jonathan A Eisen

    Diterbitkan 2011-03-01
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  14. 14
    Microbiome analysis of stool samples from African Americans with colon polyps.

    Microbiome analysis of stool samples from African Americans with colon polyps. oleh Hassan Brim, Shibu Yooseph, Erwin G Zoetendal, Edward Lee, Manolito Torralbo, Adeyinka O Laiyemo, Babak Shokrani, Karen Nelson, Hassan Ashktorab

    Diterbitkan 2013-01-01
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  15. 15
    Metagenomic Analysis of the Indian Ocean Picocyanobacterial Community: Structure, Potential Function and Evolution.

    Metagenomic Analysis of the Indian Ocean Picocyanobacterial Community: Structure, Potential Function and Evolution. oleh Beatriz Díez, Johan A A Nylander, Karolina Ininbergs, Christopher L Dupont, Andrew E Allen, Shibu Yooseph, Douglas B Rusch, Birgitta Bergman

    Diterbitkan 2016-01-01
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  16. 16
    Species-specific transcriptomic changes upon respiratory syncytial virus infection in cotton rats

    Species-specific transcriptomic changes upon respiratory syncytial virus infection in cotton rats oleh Britton A. Strickland, Seesandra V. Rajagopala, Arash Kamali, Meghan H. Shilts, Suman B. Pakala, Marina S. Boukhvalova, Shibu Yooseph, Jorge C. G. Blanco, Suman R. Das

    Diterbitkan 2022-10-01
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  17. 17
    Metagenomic exploration of viruses throughout the Indian Ocean.

    Metagenomic exploration of viruses throughout the Indian Ocean. oleh Shannon J Williamson, Lisa Zeigler Allen, Hernan A Lorenzi, Douglas W Fadrosh, Daniel Brami, Mathangi Thiagarajan, John P McCrow, Andrey Tovchigrechko, Shibu Yooseph, J Craig Venter

    Diterbitkan 2012-01-01
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  18. 18
    The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples.

    The Sorcerer II Global Ocean Sampling Expedition: metagenomic characterization of viruses within aquatic microbial samples. oleh Shannon J Williamson, Douglas B Rusch, Shibu Yooseph, Aaron L Halpern, Karla B Heidelberg, John I Glass, Cynthia Andrews-Pfannkoch, Douglas Fadrosh, Christopher S Miller, Granger Sutton, Marvin Frazier, J Craig Venter

    Diterbitkan 2008-01-01
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  19. 19
    Going deeper: metagenome of a hadopelagic microbial community.

    Going deeper: metagenome of a hadopelagic microbial community. oleh Emiley A Eloe, Douglas W Fadrosh, Mark Novotny, Lisa Zeigler Allen, Maria Kim, Mary-Jane Lombardo, Joyclyn Yee-Greenbaum, Shibu Yooseph, Eric E Allen, Roger Lasken, Shannon J Williamson, Douglas H Bartlett

    Diterbitkan 2011-01-01
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  20. 20
    Microbial community structure and composition is associated with host species and sex in Sigmodon cotton rats

    Microbial community structure and composition is associated with host species and sex in Sigmodon cotton rats oleh Britton A. Strickland, Mira C. Patel, Meghan H. Shilts, Helen H. Boone, Arash Kamali, Wei Zhang, Daniel Stylos, Marina S. Boukhvalova, Christian Rosas-Salazar, Shibu Yooseph, Seesandra V. Rajagopala, Jorge C. G. Blanco, Suman R. Das

    Diterbitkan 2021-04-01
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