Hasil Pencarian - Pratik D. Jagtap

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  1. 1
    Improve your Galaxy text life: The Query Tabular Tool [version 1; referees: 1 approved, 2 approved with reservations]

    Improve your Galaxy text life: The Query Tabular Tool [version 1; referees: 1 approved, 2 approved with reservations] oleh James E. Johnson, Praveen Kumar, Caleb Easterly, Mark Esler, Subina Mehta, Arthur C. Eschenlauer, Adrian D. Hegeman, Pratik D. Jagtap, Timothy J. Griffin

    Diterbitkan 2018-10-01
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  2. 2
    Improve your Galaxy text life: The Query Tabular Tool [version 2; referees: 2 approved, 1 approved with reservations]

    Improve your Galaxy text life: The Query Tabular Tool [version 2; referees: 2 approved, 1 approved with reservations] oleh James E. Johnson, Praveen Kumar, Caleb Easterly, Mark Esler, Subina Mehta, Arthur C. Eschenlauer, Adrian D. Hegeman, Pratik D. Jagtap, Timothy J. Griffin

    Diterbitkan 2019-01-01
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  3. 3
    A novel clinical metaproteomics workflow enables bioinformatic analysis of host-microbe dynamics in disease

    A novel clinical metaproteomics workflow enables bioinformatic analysis of host-microbe dynamics in disease oleh Katherine Do, Subina Mehta, Reid Wagner, Dechen Bhuming, Andrew T. Rajczewski, Amy P. N. Skubitz, James E. Johnson, Timothy J. Griffin, Pratik D. Jagtap

    Diterbitkan 2024-06-01
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  4. 4
    Quantitative Proteogenomic Characterization of Inflamed Murine Colon Tissue Using an Integrated Discovery, Verification, and Validation Proteogenomic Workflow

    Quantitative Proteogenomic Characterization of Inflamed Murine Colon Tissue Using an Integrated Discovery, Verification, and Validation Proteogenomic Workflow oleh Andrew T. Rajczewski, Qiyuan Han, Subina Mehta, Praveen Kumar, Pratik D. Jagtap, Charles G. Knutson, James G. Fox, Natalia Y. Tretyakova, Timothy J. Griffin

    Diterbitkan 2022-04-01
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  5. 5
    Catching the Wave: Detecting Strain-Specific SARS-CoV-2 Peptides in Clinical Samples Collected during Infection Waves from Diverse Geographical Locations

    Catching the Wave: Detecting Strain-Specific SARS-CoV-2 Peptides in Clinical Samples Collected during Infection Waves from Diverse Geographical Locations oleh Subina Mehta, Valdemir M. Carvalho, Andrew T. Rajczewski, Olivier Pible, Björn A. Grüning, James E. Johnson, Reid Wagner, Jean Armengaud, Timothy J. Griffin, Pratik D. Jagtap

    Diterbitkan 2022-10-01
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  6. 6
    Proteomic profiles in acute respiratory distress syndrome differentiates survivors from non-survivors.

    Proteomic profiles in acute respiratory distress syndrome differentiates survivors from non-survivors. oleh Maneesh Bhargava, Trisha L Becker, Kevin J Viken, Pratik D Jagtap, Sanjoy Dey, Michael S Steinbach, Baolin Wu, Vipin Kumar, Peter B Bitterman, David H Ingbar, Christine H Wendt

    Diterbitkan 2014-01-01
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  7. 7
    Integrative meta-omics in Galaxy and beyond

    Integrative meta-omics in Galaxy and beyond oleh Valerie C. Schiml, Francesco Delogu, Praveen Kumar, Benoit Kunath, Bérénice Batut, Subina Mehta, James E. Johnson, Björn Grüning, Phillip B. Pope, Pratik D. Jagtap, Timothy J. Griffin, Magnus Ø. Arntzen

    Diterbitkan 2023-07-01
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  8. 8
    Novel approach to exploring protease activity and targets in HIV-associated obstructive lung disease using combined proteomic-peptidomic analysis

    Novel approach to exploring protease activity and targets in HIV-associated obstructive lung disease using combined proteomic-peptidomic analysis oleh Sarah Samorodnitsky, Monica Kruk, Eric F. Lock, Ken M. Kunisaki, Alison Morris, Janice M. Leung, Danielle Weise, Subina Mehta, Laurie L. Parker, Pratik D. Jagtap, Timothy J. Griffin, Chris H. Wendt

    Diterbitkan 2024-09-01
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  9. 9
    ASaiM-MT: a validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework [version 2; peer review: 2 approved]

    ASaiM-MT: a validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework [version 2; peer review: 2 approved] oleh Subina Mehta, Marie Crane, Emma Leith, Bérénice Batut, Saskia Hiltemann, Magnus Ø Arntzen, Benoit J. Kunath, Phillip B. Pope, Francesco Delogu, Ray Sajulga, Praveen Kumar, James E. Johnson, Timothy J. Griffin, Pratik D. Jagtap

    Diterbitkan 2021-04-01
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  10. 10
    Precursor Intensity-Based Label-Free Quantification Software Tools for Proteomic and Multi-Omic Analysis within the Galaxy Platform

    Precursor Intensity-Based Label-Free Quantification Software Tools for Proteomic and Multi-Omic Analysis within the Galaxy Platform oleh Subina Mehta, Caleb W. Easterly, Ray Sajulga, Robert J. Millikin, Andrea Argentini, Ignacio Eguinoa, Lennart Martens, Michael R. Shortreed, Lloyd M. Smith, Thomas McGowan, Praveen Kumar, James E. Johnson, Timothy J. Griffin, Pratik D. Jagtap

    Diterbitkan 2020-07-01
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  11. 11
    An integrated metaproteomics workflow for studying host-microbe dynamics in bronchoalveolar lavage samples applied to cystic fibrosis disease

    An integrated metaproteomics workflow for studying host-microbe dynamics in bronchoalveolar lavage samples applied to cystic fibrosis disease oleh Monica E. Kruk, Subina Mehta, Kevin Murray, LeeAnn Higgins, Katherine Do, James E. Johnson, Reid Wagner, Chris H. Wendt, John B. O’Connor, J. Kirk Harris, Theresa A. Laguna, Pratik D. Jagtap, Timothy J. Griffin

    Diterbitkan 2024-07-01
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  12. 12
    Survey of metaproteomics software tools for functional microbiome analysis.

    Survey of metaproteomics software tools for functional microbiome analysis. oleh Ray Sajulga, Caleb Easterly, Michael Riffle, Bart Mesuere, Thilo Muth, Subina Mehta, Praveen Kumar, James Johnson, Bjoern Andreas Gruening, Henning Schiebenhoefer, Carolin A Kolmeder, Stephan Fuchs, Brook L Nunn, Joel Rudney, Timothy J Griffin, Pratik D Jagtap

    Diterbitkan 2020-01-01
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  13. 13
    Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework

    Disseminating Metaproteomic Informatics Capabilities and Knowledge Using the Galaxy-P Framework oleh Clemens Blank, Caleb Easterly, Bjoern Gruening, James Johnson, Carolin A. Kolmeder, Praveen Kumar, Damon May, Subina Mehta, Bart Mesuere, Zachary Brown, Joshua E. Elias, W. Judson Hervey, Thomas McGowan, Thilo Muth, Brook L. Nunn, Joel Rudney, Alessandro Tanca, Timothy J. Griffin, Pratik D. Jagtap

    Diterbitkan 2018-01-01
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  14. 14
    The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes

    The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes oleh Tim Van Den Bossche, Magnus Ø. Arntzen, Dörte Becher, Dirk Benndorf, Vincent G. H. Eijsink, Céline Henry, Pratik D. Jagtap, Nico Jehmlich, Catherine Juste, Benoit J. Kunath, Bart Mesuere, Thilo Muth, Phillip B. Pope, Jana Seifert, Alessandro Tanca, Sergio Uzzau, Paul Wilmes, Robert L. Hettich, Jean Armengaud

    Diterbitkan 2021-12-01
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  15. 15
    Galaxy Training: A powerful framework for teaching!

    Galaxy Training: A powerful framework for teaching! oleh Saskia Hiltemann, Helena Rasche, Simon Gladman, Hans-Rudolf Hotz, Delphine Larivière, Daniel Blankenberg, Pratik D Jagtap, Thomas Wollmann, Anthony Bretaudeau, Nadia Goué, Timothy J Griffin, Coline Royaux, Yvan Le Bras, Subina Mehta, Anna Syme, Frederik Coppens, Bert Droesbeke, Nicola Soranzo, Wendi Bacon, Fotis Psomopoulos, Cristóbal Gallardo-Alba, John Davis, Melanie Christine Föll, Matthias Fahrner, Maria A Doyle, Beatriz Serrano-Solano, Anne Claire Fouilloux, Peter van Heusden, Wolfgang Maier, Dave Clements, Florian Heyl, Galaxy Training Network, Björn Grüning, Bérénice Batut

    Diterbitkan 2023-01-01
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