Hasil Pencarian - Patrick Munk

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  1. 1
    MAGICIAN: MAG simulation for investigating criteria for bioinformatic analysis

    MAGICIAN: MAG simulation for investigating criteria for bioinformatic analysis oleh Kat Steinke, Sünje J. Pamp, Patrick Munk

    Diterbitkan 2024-01-01
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  2. 2
    Flankophile: a bioinformatic pipeline for prokaryotic genomic synteny analysis

    Flankophile: a bioinformatic pipeline for prokaryotic genomic synteny analysis oleh Alix Vincent Thorn, Frank M. Aarestrup, Patrick Munk

    Diterbitkan 2024-01-01
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  3. 3
    Detection of specific uncultured bacteriophages by fluorescence in situ hybridisation in pig microbiome

    Detection of specific uncultured bacteriophages by fluorescence in situ hybridisation in pig microbiome oleh Line Jensen Ostenfeld, Patrick Munk, Frank M. Aarestrup, Saria Otani

    Diterbitkan 2023-01-01
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  4. 4
    Detection of specific uncultured bacteriophages by fluorescence in situ hybridisation in pig microbiome.

    Detection of specific uncultured bacteriophages by fluorescence in situ hybridisation in pig microbiome. oleh Line Jensen Ostenfeld, Patrick Munk, Frank M Aarestrup, Saria Otani

    Diterbitkan 2023-01-01
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  5. 5
    Robustness in quantifying the abundance of antimicrobial resistance genes in pooled faeces samples from batches of slaughter pigs using metagenomics analysis

    Robustness in quantifying the abundance of antimicrobial resistance genes in pooled faeces samples from batches of slaughter pigs using metagenomics analysis oleh Vibe Dalhoff Andersen, Marie Stengaard Jensen, Patrick Munk, Håkan Vigre

    Diterbitkan 2021-03-01
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  6. 6
    A curated data resource of 214K metagenomes for characterization of the global antimicrobial resistome.

    A curated data resource of 214K metagenomes for characterization of the global antimicrobial resistome. oleh Hannah-Marie Martiny, Patrick Munk, Christian Brinch, Frank M Aarestrup, Thomas N Petersen

    Diterbitkan 2022-09-01
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  7. 7
    Global Distribution of mcr Gene Variants in 214K Metagenomic Samples

    Global Distribution of mcr Gene Variants in 214K Metagenomic Samples oleh Hannah-Marie Martiny, Patrick Munk, Christian Brinch, Judit Szarvas, Frank M. Aarestrup, Thomas Nordahl Petersen

    Diterbitkan 2022-04-01
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  8. 8
    Utilizing co-abundances of antimicrobial resistance genes to identify potential co-selection in the resistome

    Utilizing co-abundances of antimicrobial resistance genes to identify potential co-selection in the resistome oleh Hannah-Marie Martiny, Patrick Munk, Christian Brinch, Frank M. Aarestrup, M. Luz Calle, Thomas N. Petersen

    Diterbitkan 2024-07-01
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  9. 9
    Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition

    Impact of Sample Type and DNA Isolation Procedure on Genomic Inference of Microbiome Composition oleh Berith E. Knudsen, Lasse Bergmark, Patrick Munk, Oksana Lukjancenko, Anders Priemé, Frank M. Aarestrup, Sünje J. Pamp

    Diterbitkan 2016-10-01
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  10. 10
    Global within-species phylogenetics of sewage microbes suggest that local adaptation shapes geographical bacterial clustering

    Global within-species phylogenetics of sewage microbes suggest that local adaptation shapes geographical bacterial clustering oleh Marie Louise Jespersen, Patrick Munk, Joachim Johansen, Rolf Sommer Kaas, Henry Webel, Håkan Vigre, Henrik Bjørn Nielsen, Simon Rasmussen, Frank M. Aarestrup

    Diterbitkan 2023-07-01
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  11. 11
    Metagenomics analysis of sewage for surveillance of antimicrobial resistance in South Africa

    Metagenomics analysis of sewage for surveillance of antimicrobial resistance in South Africa oleh Anthony M. Smith, Masindi Ramudzulu, Patrick Munk, Baptiste J. P. Avot, Kerneels C. M. Esterhuyse, Nico van Blerk, Stanford Kwenda, Phuti Sekwadi

    Diterbitkan 2024-01-01
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  12. 12
    SourceFinder: a Machine-Learning-Based Tool for Identification of Chromosomal, Plasmid, and Bacteriophage Sequences from Assemblies

    SourceFinder: a Machine-Learning-Based Tool for Identification of Chromosomal, Plasmid, and Bacteriophage Sequences from Assemblies oleh Derya Aytan-Aktug, Vladislav Grigorjev, Judit Szarvas, Philip T. L. C. Clausen, Patrick Munk, Marcus Nguyen, James J. Davis, Frank M. Aarestrup, Ole Lund

    Diterbitkan 2022-12-01
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  13. 13
    PlasmidHostFinder: Prediction of Plasmid Hosts Using Random Forest

    PlasmidHostFinder: Prediction of Plasmid Hosts Using Random Forest oleh Derya Aytan-Aktug, Philip T. L. C. Clausen, Judit Szarvas, Patrick Munk, Saria Otani, Marcus Nguyen, James J. Davis, Ole Lund, Frank M. Aarestrup

    Diterbitkan 2022-04-01
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  14. 14
    Association of health, nutrition, and socioeconomic variables with global antimicrobial resistance: a modelling study

    Association of health, nutrition, and socioeconomic variables with global antimicrobial resistance: a modelling study oleh Patrick Murigu Kamau Njage, PhD, Bram van Bunnik, PhD, Patrick Munk, PhD, Ana Rita Pinheiro Marques, PhD, Frank M Aarestrup, ProfPhD

    Diterbitkan 2023-11-01
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  15. 15
    Author Correction: Setting a baseline for global urban virome surveillance in sewage

    Author Correction: Setting a baseline for global urban virome surveillance in sewage oleh David F. Nieuwenhuijse, Bas B. Oude Munnink, My V. T. Phan, the Global Sewage Surveillance project consortium, Patrick Munk, Shweta Venkatakrishnan, Frank M. Aarestrup, Matthew Cotten, Marion P. G. Koopmans

    Diterbitkan 2021-08-01
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  16. 16
    Patterns of Gene Content and Co-occurrence Constrain the Evolutionary Path toward Animal Association in Candidate Phyla Radiation Bacteria

    Patterns of Gene Content and Co-occurrence Constrain the Evolutionary Path toward Animal Association in Candidate Phyla Radiation Bacteria oleh Alexander L. Jaffe, Alex D. Thomas, Christine He, Ray Keren, Luis E. Valentin-Alvarado, Patrick Munk, Keith Bouma-Gregson, Ibrahim F. Farag, Yuki Amano, Rohan Sachdeva, Patrick T. West, Jillian F. Banfield

    Diterbitkan 2021-08-01
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  17. 17
    Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance

    Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance oleh Patrick Munk, Christian Brinch, Frederik Duus Møller, Thomas N. Petersen, Rene S. Hendriksen, Anne Mette Seyfarth, Jette S. Kjeldgaard, Christina Aaby Svendsen, Bram van Bunnik, Fanny Berglund, Global Sewage Surveillance Consortium, D. G. Joakim Larsson, Marion Koopmans, Mark Woolhouse, Frank M. Aarestrup

    Diterbitkan 2022-12-01
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  18. 18
    Author Correction: Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance

    Author Correction: Genomic analysis of sewage from 101 countries reveals global landscape of antimicrobial resistance oleh Patrick Munk, Christian Brinch, Frederik Duus Møller, Thomas N. Petersen, Rene S. Hendriksen, Anne Mette Seyfarth, Jette S. Kjeldgaard, Christina Aaby Svendsen, Bram van Bunnik, Fanny Berglund, Global Sewage Surveillance Consortium, D. G. Joakim Larsson, Marion Koopmans, Mark Woolhouse, Frank M. Aarestrup

    Diterbitkan 2023-01-01
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  19. 19
    Farm dust resistomes and bacterial microbiomes in European poultry and pig farms

    Farm dust resistomes and bacterial microbiomes in European poultry and pig farms oleh Roosmarijn E.C. Luiken, Liese Van Gompel, Alex Bossers, Patrick Munk, Philip Joosten, Rasmus Borup Hansen, Berith E. Knudsen, Silvia García-Cobos, Jeroen Dewulf, Frank M. Aarestrup, Jaap A. Wagenaar, Lidwien A.M. Smit, Dik J. Mevius, Dick J.J. Heederik, Heike Schmitt

    Diterbitkan 2020-10-01
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  20. 20
    Pathogen surveillance in the informal settlement, Kibera, Kenya, using a metagenomics approach.

    Pathogen surveillance in the informal settlement, Kibera, Kenya, using a metagenomics approach. oleh Rene S Hendriksen, Oksana Lukjancenko, Patrick Munk, Mathis H Hjelmsø, Jennifer R Verani, Eric Ng'eno, Godfrey Bigogo, Samuel Kiplangat, Traoré Oumar, Lasse Bergmark, Timo Röder, John C Neatherlin, Onyango Clayton, Tine Hald, Susanne Karlsmose, Sünje J Pamp, Barry Fields, Joel M Montgomery, Frank M Aarestrup

    Diterbitkan 2019-01-01
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