Genetically Modified Micro-Organisms for Industrial Food Enzyme Production: An Overview by Marie Deckers, Dieter Deforce, Marie-Alice Fraiture, Nancy H.C. Roosens

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Development of a Taxon-Specific Real-Time PCR Method Targeting the <i>Bacillus subtilis</i> Group to Strengthen the Control of Genetically Modified Bacteria in Fermentation Product... by Marie-Alice Fraiture, Andrea Gobbo, Nina Papazova, Nancy H. C. Roosens

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Development and validation of an integrated DNA walking strategy to detect GMO expressing cry genes by Marie-Alice Fraiture, Julie Vandamme, Philippe Herman, Nancy H. C. Roosens

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Development of a Taxon-Specific Real-Time Polymerase Chain Reaction Method to Detect <i>Trichoderma reesei</i> Contaminations in Fermentation Products by Marie-Alice Fraiture, Andrea Gobbo, Nina Papazova, Nancy H. C. Roosens

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Comparison of 6 DNA extraction methods for isolation of high yield of high molecular weight DNA suitable for shotgun metagenomics Nanopore sequencing to detect bacteria by Mathieu Gand, Bram Bloemen, Kevin Vanneste, Nancy H. C. Roosens, Sigrid C. J. De Keersmaecker

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A systematic review and meta-analysis of host genetic factors associated with influenza severity by Nina Van Goethem, Célestin Danwang, Nathalie Bossuyt, Herman Van Oyen, Nancy H. C. Roosens, Annie Robert

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Development of a portable on-site applicable metagenomic data generation workflow for enhanced pathogen and antimicrobial resistance surveillance by Bram Bloemen, Mathieu Gand, Kevin Vanneste, Kathleen Marchal, Nancy H. C. Roosens, Sigrid C. J. De Keersmaecker

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Development of Digital Droplet PCR Targeting the Influenza H3N2 Oseltamivir-Resistant E119V Mutation and Its Performance through the Use of Reverse Genetics Mutants by Laura A. E. Van Poelvoorde, François E. Dufrasne, Steven Van Gucht, Xavier Saelens, Nancy H. C. Roosens

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Gender‐dependent association between exhaled nitric oxide and the CC16 38AA genotype in young school children by Sarah J. D. Nauwelaerts, Nancy H. C. Roosens, Koen De Cremer, Alfred Bernard, Sigrid C. J. De Keersmaecker

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Development of a multiplex mass spectrometry method for simultaneous quantification of urinary proteins related to respiratory health by Sarah J. D. Nauwelaerts, Nancy H. C. Roosens, Alfred Bernard, Sigrid C. J. De Keersmaecker, Koen De Cremer

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Benchmarking bacterial taxonomic classification using nanopore metagenomics data of several mock communities by Alexander Van Uffelen, Andrés Posadas, Nancy H. C. Roosens, Kathleen Marchal, Sigrid C. J. De Keersmaecker, Kevin Vanneste

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Characterization of Genetically Modified Microorganisms Using Short- and Long-Read Whole-Genome Sequencing Reveals Contaminations of Related Origin in Multiple Commercial Food Enzy... by Jolien D’aes, Marie-Alice Fraiture, Bert Bogaerts, Sigrid C. J. De Keersmaecker, Nancy H. C. Roosens, Kevin Vanneste

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Comparison of SNP-based subtyping workflows for bacterial isolates using WGS data, applied to Salmonella enterica serotype Typhimurium and serotype 1,4,[5],12:i:. by Assia Saltykova, Véronique Wuyts, Wesley Mattheus, Sophie Bertrand, Nancy H C Roosens, Kathleen Marchal, Sigrid C J De Keersmaecker

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Shifting national surveillance of Shigella infections toward geno‐serotyping by the development of a tailored Luminex assay and NGS workflow by Eleonora Ventola, Bert Bogaerts, Sigrid C. J. De Keersmaecker, Kevin Vanneste, Nancy H. C. Roosens, Wesley Mattheus, Pieter‐Jan Ceyssens

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Status and potential of bacterial genomics for public health practice: a scoping review by Nina Van Goethem, Tine Descamps, Brecht Devleesschauwer, Nancy H. C. Roosens, Nele A. M. Boon, Herman Van Oyen, Annie Robert

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Development of an NGS-Based Workflow for Improved Monitoring of Circulating Plasmids in Support of Risk Assessment of Antimicrobial Resistance Gene Dissemination by Bas Berbers, Pieter-Jan Ceyssens, Pierre Bogaerts, Kevin Vanneste, Nancy H. C. Roosens, Kathleen Marchal, Sigrid C. J. De Keersmaecker

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Detailed Evaluation of Data Analysis Tools for Subtyping of Bacterial Isolates Based on Whole Genome Sequencing: Neisseria meningitidis as a Proof of Concept by Assia Saltykova, Assia Saltykova, Wesley Mattheus, Sophie Bertrand, Nancy H. C. Roosens, Kathleen Marchal, Kathleen Marchal, Sigrid C. J. De Keersmaecker

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Strain-Level Metagenomic Data Analysis of Enriched In Vitro and In Silico Spiked Food Samples: Paving the Way towards a Culture-Free Foodborne Outbreak Investigation Using STEC as... by Assia Saltykova, Florence E. Buytaers, Sarah Denayer, Bavo Verhaegen, Denis Piérard, Nancy H. C. Roosens, Kathleen Marchal, Sigrid C. J. De Keersmaecker

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Use of Whole Genome Sequencing Data for a First in Silico Specificity Evaluation of the RT-qPCR Assays Used for SARS-CoV-2 Detection by Mathieu Gand, Kevin Vanneste, Isabelle Thomas, Steven Van Gucht, Arnaud Capron, Philippe Herman, Nancy H. C. Roosens, Sigrid C. J. De Keersmaecker

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Development of a Droplet Digital PCR to Monitor SARS-CoV-2 Omicron Variant BA.2 in Wastewater Samples by Laura A. E. Van Poelvoorde, Corinne Picalausa, Andrea Gobbo, Bavo Verhaegen, Marie Lesenfants, Philippe Herman, Koenraad Van Hoorde, Nancy H. C. Roosens

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