Hasil Pencarian - MacKenzie Bryant

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  1. 1
    Profiling the airway in the macaque model of tuberculosis reveals variable microbial dysbiosis and alteration of community structure

    Profiling the airway in the macaque model of tuberculosis reveals variable microbial dysbiosis and alteration of community structure oleh Anthony M Cadena, Yixuan Ma, Tao Ding, MacKenzie Bryant, Pauline Maiello, Adam Geber, Philana Ling Lin, JoAnne L Flynn, Elodie Ghedin

    Diterbitkan 2018-10-01
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  2. 2
    Evaluation of the Effect of Storage Methods on Fecal, Saliva, and Skin Microbiome Composition

    Evaluation of the Effect of Storage Methods on Fecal, Saliva, and Skin Microbiome Composition oleh Clarisse Marotz, Kellen J. Cavagnero, Se Jin Song, Daniel McDonald, Stephen Wandro, Greg Humphrey, MacKenzie Bryant, Gail Ackermann, Edgar Diaz, Rob Knight

    Diterbitkan 2021-04-01
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  3. 3
    Evaluation of the Effect of Storage Methods on Fecal, Saliva, and Skin Microbiome Composition

    Evaluation of the Effect of Storage Methods on Fecal, Saliva, and Skin Microbiome Composition oleh Clarisse Marotz, Kellen J. Cavagnero, Se Jin Song, Daniel McDonald, Stephen Wandro, Greg Humphrey, MacKenzie Bryant, Gail Ackermann, Edgar Diaz, Rob Knight

    Diterbitkan 2021-04-01
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  4. 4
    Effects of Variation in Urine Sample Storage Conditions on 16S Urogenital Microbiome Analyses

    Effects of Variation in Urine Sample Storage Conditions on 16S Urogenital Microbiome Analyses oleh Tanya Kumar, MacKenzie Bryant, Kalen Cantrell, Se Jin Song, Daniel McDonald, Helena M. Tubb, Sawyer Farmer, Emily S. Lukacz, Linda Brubaker, Rob Knight

    Diterbitkan 2023-02-01
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  5. 5
    Impact of diet change on the gut microbiome of common marmosets (Callithrix jacchus)

    Impact of diet change on the gut microbiome of common marmosets (Callithrix jacchus) oleh Cassandra Tang-Wing, Ipsita Mohanty, MacKenzie Bryant, Katherine Makowski, Daira Melendez, Pieter C. Dorrestein, Rob Knight, Andrés Mauricio Caraballo-Rodríguez, Celeste Allaband, Keith Jenné

    Diterbitkan 2024-08-01
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  6. 6
    Effects of variation in sample storage conditions and swab order on 16S vaginal microbiome analyses

    Effects of variation in sample storage conditions and swab order on 16S vaginal microbiome analyses oleh Tanya Kumar, MacKenzie Bryant, Kalen Cantrell, Se Jin Song, Daniel McDonald, Helena M. Tubb, Sawyer Farmer, Amanda Lewis, Emily S. Lukacz, Linda Brubaker, Rob Knight

    Diterbitkan 2024-01-01
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  7. 7
    A comparison of six DNA extraction protocols for 16S, ITS and shotgun metagenomic sequencing of microbial communities

    A comparison of six DNA extraction protocols for 16S, ITS and shotgun metagenomic sequencing of microbial communities oleh Justin P Shaffer, Carolina S Carpenter, Cameron Martino, Rodolfo A Salido, Jeremiah J Minich, MacKenzie Bryant, Karenina Sanders, Tara Schwartz, Gregory Humphrey, Austin D Swafford, Rob Knight

    Diterbitkan 2022-06-01
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  8. 8
    Maximizing the potential of high-throughput next-generation sequencing through precise normalization based on read count distribution

    Maximizing the potential of high-throughput next-generation sequencing through precise normalization based on read count distribution oleh Caitriona Brennan, Rodolfo A. Salido, Pedro Belda-Ferre, MacKenzie Bryant, Charles Cowart, Maria D. Tiu, Antonio González, Daniel McDonald, Caitlin Tribelhorn, Amir Zarrinpar, Rob Knight

    Diterbitkan 2023-08-01
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  9. 9
    Reduced Independence in Daily Living Is Associated with the Gut Microbiome in People with HIV and HCV

    Reduced Independence in Daily Living Is Associated with the Gut Microbiome in People with HIV and HCV oleh Bryn C. Taylor, Kelly C. Weldon, Ronald J. Ellis, Donald Franklin, Daniel McDonald, Gregory Humphrey, MacKenzie Bryant, Julia Toronczak, Tara Schwartz, Jennifer Iudicello, Robert Heaton, Igor Grant, Sara Gianella, Scott Letendre, Austin Swafford, Pieter C. Dorrestein, Rob Knight

    Diterbitkan 2020-10-01
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  10. 10
    A comparison of DNA/RNA extraction protocols for high-throughput sequencing of microbial communities

    A comparison of DNA/RNA extraction protocols for high-throughput sequencing of microbial communities oleh Justin P Shaffer, Clarisse Marotz, Pedro Belda-Ferre, Cameron Martino, Stephen Wandro, Mehrbod Estaki, Rodolfo A Salido, Carolina S Carpenter, Livia S Zaramela, Jeremiah J Minich, MacKenzie Bryant, Karenina Sanders, Serena Fraraccio, Gail Ackermann, Gregory Humphrey, Austin D Swafford, Sandrine Miller-Montgomery, Rob Knight

    Diterbitkan 2021-03-01
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  11. 11
    Pangenome comparison of Bacteroides fragilis genomospecies unveils genetic diversity and ecological insights

    Pangenome comparison of Bacteroides fragilis genomospecies unveils genetic diversity and ecological insights oleh Renee E. Oles, Marvic Carrillo Terrazas, Luke R. Loomis, Chia-Yun Hsu, Caitlin Tribelhorn, Pedro Belda-Ferre, Allison C. Ea, MacKenzie Bryant, Jocelyn A. Young, Hannah C. Carrow, William J. Sandborn, Parambir S. Dulai, Mamata Sivagnanam, David Pride, Rob Knight, Hiutung Chu

    Diterbitkan 2024-07-01
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  12. 12
    Depression in Individuals Coinfected with HIV and HCV Is Associated with Systematic Differences in the Gut Microbiome and Metabolome

    Depression in Individuals Coinfected with HIV and HCV Is Associated with Systematic Differences in the Gut Microbiome and Metabolome oleh Bryn C. Taylor, Kelly C. Weldon, Ronald J. Ellis, Donald Franklin, Tobin Groth, Emily C. Gentry, Anupriya Tripathi, Daniel McDonald, Gregory Humphrey, MacKenzie Bryant, Julia Toronczak, Tara Schwartz, Michelli F. Oliveira, Robert Heaton, Igor Grant, Sara Gianella, Scott Letendre, Austin Swafford, Pieter C. Dorrestein, Rob Knight

    Diterbitkan 2020-10-01
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  13. 13
    Gut microbiota, circulating inflammatory markers and metabolites, and carotid artery atherosclerosis in HIV infection

    Gut microbiota, circulating inflammatory markers and metabolites, and carotid artery atherosclerosis in HIV infection oleh Zheng Wang, Brandilyn A. Peters, MacKenzie Bryant, David B. Hanna, Tara Schwartz, Tao Wang, Christopher C. Sollecito, Mykhaylo Usyk, Evan Grassi, Fanua Wiek, Lauren St. Peter, Wendy S. Post, Alan L. Landay, Howard N. Hodis, Kathleen M. Weber, Audrey French, Elizabeth T. Golub, Jason Lazar, Deborah Gustafson, Anjali Sharma, Kathryn Anastos, Clary B. Clish, Robert D. Burk, Robert C. Kaplan, Rob Knight, Qibin Qi

    Diterbitkan 2023-05-01
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  14. 14
    SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment

    SARS-CoV-2 detection status associates with bacterial community composition in patients and the hospital environment oleh Clarisse Marotz, Pedro Belda-Ferre, Farhana Ali, Promi Das, Shi Huang, Kalen Cantrell, Lingjing Jiang, Cameron Martino, Rachel E. Diner, Gibraan Rahman, Daniel McDonald, George Armstrong, Sho Kodera, Sonya Donato, Gertrude Ecklu-Mensah, Neil Gottel, Mariana C. Salas Garcia, Leslie Y. Chiang, Rodolfo A. Salido, Justin P. Shaffer, Mac Kenzie Bryant, Karenina Sanders, Greg Humphrey, Gail Ackermann, Niina Haiminen, Kristen L. Beck, Ho-Cheol Kim, Anna Paola Carrieri, Laxmi Parida, Yoshiki Vázquez-Baeza, Francesca J. Torriani, Rob Knight, Jack Gilbert, Daniel A. Sweeney, Sarah M. Allard

    Diterbitkan 2021-06-01
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  15. 15
    SARS-CoV-2 Distribution in Residential Housing Suggests Contact Deposition and Correlates with Rothia sp.

    SARS-CoV-2 Distribution in Residential Housing Suggests Contact Deposition and Correlates with Rothia sp. oleh Victor J. Cantú, Rodolfo A. Salido, Shi Huang, Gibraan Rahman, Rebecca Tsai, Holly Valentine, Celestine G. Magallanes, Stefan Aigner, Nathan A. Baer, Tom Barber, Pedro Belda-Ferre, Maryann Betty, MacKenzie Bryant, Martín Casas Maya, Anelizze Castro-Martínez, Marisol Chacón, Willi Cheung, Evelyn S. Crescini, Peter De Hoff, Emily Eisner, Sawyer Farmer, Abbas Hakim, Laura Kohn, Alma L. Lastrella, Elijah S. Lawrence, Sydney C. Morgan, Toan T. Ngo, Alhakam Nouri, Ashley Plascencia, Christopher A. Ruiz, Shashank Sathe, Phoebe Seaver, Tara Shwartz, Elizabeth W. Smoot, R. Tyler Ostrander, Thomas Valles, Gene W. Yeo, Louise C. Laurent, Rebecca Fielding-Miller, Rob Knight

    Diterbitkan 2022-06-01
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