Hasil Pencarian - John D Chodera

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  1. 1
    Spectral Rate Theory for Two-State Kinetics

    Spectral Rate Theory for Two-State Kinetics oleh Jan-Hendrik Prinz, John D. Chodera, Frank Noé

    Diterbitkan 2014-02-01
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  2. 2
    Using Nonequilibrium Fluctuation Theorems to Understand and Correct Errors in Equilibrium and Nonequilibrium Simulations of Discrete Langevin Dynamics

    Using Nonequilibrium Fluctuation Theorems to Understand and Correct Errors in Equilibrium and Nonequilibrium Simulations of Discrete Langevin Dynamics oleh David A. Sivak, John D. Chodera, Gavin E. Crooks

    Diterbitkan 2013-01-01
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  3. 3
    Ensembler: Enabling High-Throughput Molecular Simulations at the Superfamily Scale.

    Ensembler: Enabling High-Throughput Molecular Simulations at the Superfamily Scale. oleh Daniel L Parton, Patrick B Grinaway, Sonya M Hanson, Kyle A Beauchamp, John D Chodera

    Diterbitkan 2016-06-01
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  4. 4
    Quantifying Configuration-Sampling Error in Langevin Simulations of Complex Molecular Systems

    Quantifying Configuration-Sampling Error in Langevin Simulations of Complex Molecular Systems oleh Josh Fass, David A. Sivak, Gavin E. Crooks, Kyle A. Beauchamp, Benedict Leimkuhler, John D. Chodera

    Diterbitkan 2018-04-01
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  5. 5
    Death by a thousand cuts through kinase inhibitor combinations that maximize selectivity and enable rational multitargeting

    Death by a thousand cuts through kinase inhibitor combinations that maximize selectivity and enable rational multitargeting oleh Ian R Outhwaite, Sukrit Singh, Benedict-Tilman Berger, Stefan Knapp, John D Chodera, Markus A Seeliger

    Diterbitkan 2023-12-01
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  6. 6
    Ancestral reconstruction reveals mechanisms of ERK regulatory evolution

    Ancestral reconstruction reveals mechanisms of ERK regulatory evolution oleh Dajun Sang, Sudarshan Pinglay, Rafal P Wiewiora, Myvizhi E Selvan, Hua Jane Lou, John D Chodera, Benjamin E Turk, Zeynep H Gümüş, Liam J Holt

    Diterbitkan 2019-08-01
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  7. 7
    Bayesian analysis of isothermal titration calorimetry for binding thermodynamics.

    Bayesian analysis of isothermal titration calorimetry for binding thermodynamics. oleh Trung Hai Nguyen, Ariën S Rustenburg, Stefan G Krimmer, Hexi Zhang, John D Clark, Paul A Novick, Kim Branson, Vijay S Pande, John D Chodera, David D L Minh

    Diterbitkan 2018-01-01
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  8. 8
    SPICE, A Dataset of Drug-like Molecules and Peptides for Training Machine Learning Potentials

    SPICE, A Dataset of Drug-like Molecules and Peptides for Training Machine Learning Potentials oleh Peter Eastman, Pavan Kumar Behara, David L. Dotson, Raimondas Galvelis, John E. Herr, Josh T. Horton, Yuezhi Mao, John D. Chodera, Benjamin P. Pritchard, Yuanqing Wang, Gianni De Fabritiis, Thomas E. Markland

    Diterbitkan 2023-01-01
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  9. 9
    A dynamic mechanism for allosteric activation of Aurora kinase A by activation loop phosphorylation

    A dynamic mechanism for allosteric activation of Aurora kinase A by activation loop phosphorylation oleh Emily F Ruff, Joseph M Muretta, Andrew R Thompson, Eric W Lake, Soreen Cyphers, Steven K Albanese, Sonya M Hanson, Julie M Behr, David D Thomas, John D Chodera, Nicholas M Levinson

    Diterbitkan 2018-02-01
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  10. 10
    OpenMM 7: Rapid development of high performance algorithms for molecular dynamics.

    OpenMM 7: Rapid development of high performance algorithms for molecular dynamics. oleh Peter Eastman, Jason Swails, John D Chodera, Robert T McGibbon, Yutong Zhao, Kyle A Beauchamp, Lee-Ping Wang, Andrew C Simmonett, Matthew P Harrigan, Chaya D Stern, Rafal P Wiewiora, Bernard R Brooks, Vijay S Pande

    Diterbitkan 2017-07-01
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  11. 11
    The dynamic conformational landscape of the protein methyltransferase SETD8

    The dynamic conformational landscape of the protein methyltransferase SETD8 oleh Shi Chen, Rafal P Wiewiora, Fanwang Meng, Nicolas Babault, Anqi Ma, Wenyu Yu, Kun Qian, Hao Hu, Hua Zou, Junyi Wang, Shijie Fan, Gil Blum, Fabio Pittella-Silva, Kyle A Beauchamp, Wolfram Tempel, Hualiang Jiang, Kaixian Chen, Robert J Skene, Yujun George Zheng, Peter J Brown, Jian Jin, Cheng Luo, John D Chodera, Minkui Luo

    Diterbitkan 2019-05-01
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  12. 12
    Small-molecule targeting of MUSASHI RNA-binding activity in acute myeloid leukemia

    Small-molecule targeting of MUSASHI RNA-binding activity in acute myeloid leukemia oleh Gerard Minuesa, Steven K. Albanese, Wei Xie, Yaniv Kazansky, Daniel Worroll, Arthur Chow, Alexandra Schurer, Sun-Mi Park, Christina Z. Rotsides, James Taggart, Andrea Rizzi, Levi N. Naden, Timothy Chou, Saroj Gourkanti, Daniel Cappel, Maria C. Passarelli, Lauren Fairchild, Carolina Adura, J. Fraser Glickman, Jessica Schulman, Christopher Famulare, Minal Patel, Joseph K. Eibl, Gregory M. Ross, Shibani Bhattacharya, Derek S. Tan, Christina S. Leslie, Thijs Beuming, Dinshaw J. Patel, Yehuda Goldgur, John D. Chodera, Michael G. Kharas

    Diterbitkan 2019-06-01
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  13. 13
    A Small-Molecule Pan-Id Antagonist Inhibits Pathologic Ocular Neovascularization

    A Small-Molecule Pan-Id Antagonist Inhibits Pathologic Ocular Neovascularization oleh Paulina M. Wojnarowicz, Raquel Lima e Silva, Masayuki Ohnaka, Sang Bae Lee, Yvette Chin, Anita Kulukian, Sung-Hee Chang, Bina Desai, Marta Garcia Escolano, Riddhi Shah, Marta Garcia-Cao, Sijia Xu, Rashmi Kadam, Yehuda Goldgur, Meredith A. Miller, Ouathek Ouerfelli, Guangli Yang, Tsutomu Arakawa, Steven K. Albanese, William A. Garland, Glenn Stoller, Jaideep Chaudhary, Larry Norton, Rajesh Kumar Soni, John Philip, Ronald C. Hendrickson, Antonio Iavarone, Andrew J. Dannenberg, John D. Chodera, Nikola Pavletich, Anna Lasorella, Peter A. Campochiaro, Robert Benezra

    Diterbitkan 2019-10-01
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