Hasil Pencarian - Ivan Liachko

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  1. 1
    A comprehensive genome-wide map of autonomously replicating sequences in a naive genome.

    A comprehensive genome-wide map of autonomously replicating sequences in a naive genome. oleh Ivan Liachko, Anand Bhaskar, Chanmi Lee, Shau Chee Claire Chung, Bik-Kwoon Tye, Uri Keich

    Diterbitkan 2010-05-01
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  2. 2
    The fitness consequences of aneuploidy are driven by condition-dependent gene effects.

    The fitness consequences of aneuploidy are driven by condition-dependent gene effects. oleh Anna B Sunshine, Celia Payen, Giang T Ong, Ivan Liachko, Kean Ming Tan, Maitreya J Dunham

    Diterbitkan 2015-05-01
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  3. 3
    Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning

    Integrating chromatin conformation information in a self-supervised learning model improves metagenome binning oleh Harrison Ho, Mansi Chovatia, Rob Egan, Guifen He, Yuko Yoshinaga, Ivan Liachko, Ronan O’Malley, Zhong Wang

    Diterbitkan 2023-09-01
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  4. 4
    High Throughput Analyses of Budding Yeast ARSs Reveal New DNA Elements Capable of Conferring Centromere-Independent Plasmid Propagation

    High Throughput Analyses of Budding Yeast ARSs Reveal New DNA Elements Capable of Conferring Centromere-Independent Plasmid Propagation oleh Timothy Hoggard, Ivan Liachko, Cassaundra Burt, Troy Meikle, Katherine Jiang, Gheorghe Craciun, Maitreya J. Dunham, Catherine A. Fox

    Diterbitkan 2016-04-01
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  5. 5
    The dynamic three-dimensional organization of the diploid yeast genome

    The dynamic three-dimensional organization of the diploid yeast genome oleh Seungsoo Kim, Ivan Liachko, Donna G Brickner, Kate Cook, William S Noble, Jason H Brickner, Jay Shendure, Maitreya J Dunham

    Diterbitkan 2017-05-01
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  6. 6
    Author Correction: Proximity ligation strategy for the genomic reconstruction of microbial communities associated with the ectoparasite Caligus rogercresseyi

    Author Correction: Proximity ligation strategy for the genomic reconstruction of microbial communities associated with the ectoparasite Caligus rogercresseyi oleh Diego Valenzuela-Miranda, Ana Teresa Gonçalves, Valentina Valenzuela-Muñoz, Gustavo Nuñez-Acuña, Ivan Liachko, Bradley Nelson, Cristian Gallardo-Escarate

    Diterbitkan 2022-05-01
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  7. 7
    Proximity ligation strategy for the genomic reconstruction of microbial communities associated with the ectoparasite Caligus rogercresseyi

    Proximity ligation strategy for the genomic reconstruction of microbial communities associated with the ectoparasite Caligus rogercresseyi oleh Diego Valenzuela-Miranda, Ana Teresa Gonçalves, Valentina Valenzuela-Muñoz, Gustavo Nuñez-Acuña, Ivan Liachko, Bradley Nelson, Cristian Gallardo-Escarate

    Diterbitkan 2022-01-01
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  8. 8
    GC-rich DNA elements enable replication origin activity in the methylotrophic yeast Pichia pastoris.

    GC-rich DNA elements enable replication origin activity in the methylotrophic yeast Pichia pastoris. oleh Ivan Liachko, Rachel A Youngblood, Kyle Tsui, Kerry L Bubb, Christine Queitsch, M K Raghuraman, Corey Nislow, Bonita J Brewer, Maitreya J Dunham

    Diterbitkan 2014-03-01
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  9. 9
    Origin Replication Complex Binding, Nucleosome Depletion Patterns, and a Primary Sequence Motif Can Predict Origins of Replication in a Genome with Epigenetic Centromeres

    Origin Replication Complex Binding, Nucleosome Depletion Patterns, and a Primary Sequence Motif Can Predict Origins of Replication in a Genome with Epigenetic Centromeres oleh Hung-Ji Tsai, Joshua A. Baller, Ivan Liachko, Amnon Koren, Laura S. Burrack, Meleah A. Hickman, Mathuravani A. Thevandavakkam, Laura N. Rusche, Judith Berman

    Diterbitkan 2014-10-01
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  10. 10
    Degradation of Recalcitrant Polyurethane and Xenobiotic Additives by a Selected Landfill Microbial Community and Its Biodegradative Potential Revealed by Proximity Ligation-Based Metagenomic Analysis

    Degradation of Recalcitrant Polyurethane and Xenobiotic Additives by a Selected Landfill Microbial Community and Its Biodegradative Potential Revealed by Proximity Ligation-Based M... oleh Itzel Gaytán, Ayixon Sánchez-Reyes, Manuel Burelo, Martín Vargas-Suárez, Ivan Liachko, Maximilian Press, Shawn Sullivan, M. Javier Cruz-Gómez, Herminia Loza-Tavera

    Diterbitkan 2020-01-01
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  11. 11
    Chromosome-scale genome assembly of the sea louse Caligus rogercresseyi by SMRT sequencing and Hi-C analysis

    Chromosome-scale genome assembly of the sea louse Caligus rogercresseyi by SMRT sequencing and Hi-C analysis oleh Cristian Gallardo-Escárate, Valentina Valenzuela-Muñoz, Gustavo Nuñez-Acuña, Diego Valenzuela-Miranda, Ana Teresa Gonçalves, Hugo Escobar-Sepulveda, Ivan Liachko, Bradley Nelson, Steven Roberts, Wesley Warren

    Diterbitkan 2021-02-01
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  12. 12
    Repeat elements organise 3D genome structure and mediate transcription in the filamentous fungus Epichloë festucae.

    Repeat elements organise 3D genome structure and mediate transcription in the filamentous fungus Epichloë festucae. oleh David J Winter, Austen R D Ganley, Carolyn A Young, Ivan Liachko, Christopher L Schardl, Pierre-Yves Dupont, Daniel Berry, Arvina Ram, Barry Scott, Murray P Cox

    Diterbitkan 2018-10-01
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  13. 13
    Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen

    Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen oleh Robert D. Stewart, Marc D. Auffret, Amanda Warr, Andrew H. Wiser, Maximilian O. Press, Kyle W. Langford, Ivan Liachko, Timothy J. Snelling, Richard J. Dewhurst, Alan W. Walker, Rainer Roehe, Mick Watson

    Diterbitkan 2018-02-01
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  14. 14
    Neocentromeres Provide Chromosome Segregation Accuracy and Centromere Clustering to Multiple Loci along a Candida albicans Chromosome.

    Neocentromeres Provide Chromosome Segregation Accuracy and Centromere Clustering to Multiple Loci along a Candida albicans Chromosome. oleh Laura S Burrack, Hannah F Hutton, Kathleen J Matter, Shelly Applen Clancey, Ivan Liachko, Alexandra E Plemmons, Amrita Saha, Erica A Power, Breanna Turman, Mathuravani Aaditiyaa Thevandavakkam, Ferhat Ay, Maitreya J Dunham, Judith Berman

    Diterbitkan 2016-09-01
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  15. 15
    Differential paralog divergence modulates genome evolution across yeast species.

    Differential paralog divergence modulates genome evolution across yeast species. oleh Monica R Sanchez, Aaron W Miller, Ivan Liachko, Anna B Sunshine, Bryony Lynch, Mei Huang, Erica Alcantara, Christopher G DeSevo, Dave A Pai, Cheryl M Tucker, Margaret L Hoang, Maitreya J Dunham

    Diterbitkan 2017-02-01
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  16. 16
    Chromosome-scale scaffolding of the black raspberry (Rubus occidentalis L.) genome based on chromatin interaction data

    Chromosome-scale scaffolding of the black raspberry (Rubus occidentalis L.) genome based on chromatin interaction data oleh Rubina Jibran, Helge Dzierzon, Nahla Bassil, Jill M. Bushakra, Patrick P. Edger, Shawn Sullivan, Chad E. Finn, Michael Dossett, Kelly J. Vining, Robert VanBuren, Todd C. Mockler, Ivan Liachko, Kevin M. Davies, Toshi M. Foster, David Chagné

    Diterbitkan 2018-02-01
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  17. 17
    Extended haplotype-phasing of long-read de novo genome assemblies using Hi-C

    Extended haplotype-phasing of long-read de novo genome assemblies using Hi-C oleh Zev N. Kronenberg, Arang Rhie, Sergey Koren, Gregory T. Concepcion, Paul Peluso, Katherine M. Munson, David Porubsky, Kristen Kuhn, Kathryn A. Mueller, Wai Yee Low, Stefan Hiendleder, Olivier Fedrigo, Ivan Liachko, Richard J. Hall, Adam M. Phillippy, Evan E. Eichler, John L. Williams, Timothy P. L. Smith, Erich D. Jarvis, Shawn T. Sullivan, Sarah B. Kingan

    Diterbitkan 2021-04-01
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  18. 18
    Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation

    Assignment of virus and antimicrobial resistance genes to microbial hosts in a complex microbial community by combined long-read assembly and proximity ligation oleh Derek M. Bickhart, Mick Watson, Sergey Koren, Kevin Panke-Buisse, Laura M. Cersosimo, Maximilian O. Press, Curtis P. Van Tassell, Jo Ann S. Van Kessel, Bradd J. Haley, Seon Woo Kim, Cheryl Heiner, Garret Suen, Kiranmayee Bakshy, Ivan Liachko, Shawn T. Sullivan, Phillip R. Myer, Jay Ghurye, Mihai Pop, Paul J. Weimer, Adam M. Phillippy, Timothy P. L. Smith

    Diterbitkan 2019-08-01
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  19. 19
    Integration of multi-omics data reveals cis-regulatory variants that are associated with phenotypic differentiation of eastern from western pigs

    Integration of multi-omics data reveals cis-regulatory variants that are associated with phenotypic differentiation of eastern from western pigs oleh Yuwen Liu, Yang Fu, Yalan Yang, Guoqiang Yi, Jinmin Lian, Bingkun Xie, Yilong Yao, Muya Chen, Yongchao Niu, Lei Liu, Liyuan Wang, Yongsheng Zhang, Xinhao Fan, Yijie Tang, Pengxiang Yuan, Min Zhu, Qiaowei Li, Song Zhang, Yun Chen, Binhu Wang, Jieyu He, Dan Lu, Ivan Liachko, Shawn T. Sullivan, Bin Pang, Yaoqing Chen, Xin He, Kui Li, Zhonglin Tang

    Diterbitkan 2022-09-01
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