Hasil Pencarian - Elizabeth Purdom

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  1. 1
    Cobolt: integrative analysis of multimodal single-cell sequencing data

    Cobolt: integrative analysis of multimodal single-cell sequencing data oleh Boying Gong, Yun Zhou, Elizabeth Purdom

    Diterbitkan 2021-12-01
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  2. 2
    Visualizing scRNA-Seq data at population scale with GloScope

    Visualizing scRNA-Seq data at population scale with GloScope oleh Hao Wang, William Torous, Boying Gong, Elizabeth Purdom

    Diterbitkan 2024-10-01
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  3. 3
    Bioconductor workflow for single-cell RNA sequencing: Normalization, dimensionality reduction, clustering, and lineage inference [version 1; referees: 1 approved, 2 approved with reservations]

    Bioconductor workflow for single-cell RNA sequencing: Normalization, dimensionality reduction, clustering, and lineage inference [version 1; referees: 1 approved, 2 approved with r... oleh Fanny Perraudeau, Davide Risso, Kelly Street, Elizabeth Purdom, Sandrine Dudoit

    Diterbitkan 2017-07-01
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  4. 4
    mbkmeans: Fast clustering for single cell data using mini-batch k-means.

    mbkmeans: Fast clustering for single cell data using mini-batch k-means. oleh Stephanie C Hicks, Ruoxi Liu, Yuwei Ni, Elizabeth Purdom, Davide Risso

    Diterbitkan 2021-01-01
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  5. 5
    Unifying gene expression measures from multiple platforms using factor analysis.

    Unifying gene expression measures from multiple platforms using factor analysis. oleh Xin Victoria Wang, Roel G W Verhaak, Elizabeth Purdom, Paul T Spellman, Terence P Speed

    Diterbitkan 2011-03-01
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  6. 6
    clusterExperiment and RSEC: A Bioconductor package and framework for clustering of single-cell and other large gene expression datasets.

    clusterExperiment and RSEC: A Bioconductor package and framework for clustering of single-cell and other large gene expression datasets. oleh Davide Risso, Liam Purvis, Russell B Fletcher, Diya Das, John Ngai, Sandrine Dudoit, Elizabeth Purdom

    Diterbitkan 2018-09-01
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  7. 7
    Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics

    Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics oleh Kelly Street, Davide Risso, Russell B. Fletcher, Diya Das, John Ngai, Nir Yosef, Elizabeth Purdom, Sandrine Dudoit

    Diterbitkan 2018-06-01
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  8. 8
    Improving replicability in single-cell RNA-Seq cell type discovery with Dune

    Improving replicability in single-cell RNA-Seq cell type discovery with Dune oleh Hector Roux de Bézieux, Kelly Street, Stephan Fischer, Koen Van den Berge, Rebecca Chance, Davide Risso, Jesse Gillis, John Ngai, Elizabeth Purdom, Sandrine Dudoit

    Diterbitkan 2024-05-01
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  9. 9
    Pregnancy-induced gene expression changes in vivo among women with rheumatoid arthritis: a pilot study

    Pregnancy-induced gene expression changes in vivo among women with rheumatoid arthritis: a pilot study oleh Dana E. Goin, Mette Kiel Smed, Lior Pachter, Elizabeth Purdom, J. Lee Nelson, Hanne Kjærgaard, Jørn Olsen, Merete Lund Hetland, Vibeke Zoffmann, Bent Ottesen, Damini Jawaheer

    Diterbitkan 2017-05-01
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  10. 10
    Drought Shifts Sorghum Root Metabolite and Microbiome Profiles and Enriches for Pipecolic Acid

    Drought Shifts Sorghum Root Metabolite and Microbiome Profiles and Enriches for Pipecolic Acid oleh Daniel F. Caddell, Dean Pettinga, Katherine Louie, Benjamin P. Bowen, Julie A. Sievert, Joy Hollingsworth, Rebeckah Rubanowitz, Jeffery Dahlberg, Elizabeth Purdom, Trent Northen, Devin Coleman-Derr

    Diterbitkan 2023-12-01
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  11. 11
    Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics

    Fungal community assembly in drought-stressed sorghum shows stochasticity, selection, and universal ecological dynamics oleh Cheng Gao, Liliam Montoya, Ling Xu, Mary Madera, Joy Hollingsworth, Elizabeth Purdom, Vasanth Singan, John Vogel, Robert B. Hutmacher, Jeffery A. Dahlberg, Devin Coleman-Derr, Peggy G. Lemaux, John W. Taylor

    Diterbitkan 2020-01-01
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  12. 12
    Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities

    Co-occurrence networks reveal more complexity than community composition in resistance and resilience of microbial communities oleh Cheng Gao, Ling Xu, Liliam Montoya, Mary Madera, Joy Hollingsworth, Liang Chen, Elizabeth Purdom, Vasanth Singan, John Vogel, Robert B. Hutmacher, Jeffery A. Dahlberg, Devin Coleman-Derr, Peggy G. Lemaux, John W. Taylor

    Diterbitkan 2022-07-01
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  13. 13
    Defining Patient-Level Molecular Heterogeneity in Psoriasis Vulgaris Based on Single-Cell Transcriptomics

    Defining Patient-Level Molecular Heterogeneity in Psoriasis Vulgaris Based on Single-Cell Transcriptomics oleh Yale Liu, Yale Liu, Yale Liu, Hao Wang, Christopher Cook, Christopher Cook, Mark A. Taylor, Mark A. Taylor, Jeffrey P. North, Ashley Hailer, Ashley Hailer, Yanhong Shou, Arsil Sadik, Esther Kim, Elizabeth Purdom, Jeffrey B. Cheng, Jeffrey B. Cheng, Raymond J. Cho

    Diterbitkan 2022-07-01
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  14. 14
    Genome-resolved metagenomics reveals role of iron metabolism in drought-induced rhizosphere microbiome dynamics

    Genome-resolved metagenomics reveals role of iron metabolism in drought-induced rhizosphere microbiome dynamics oleh Ling Xu, Zhaobin Dong, Dawn Chiniquy, Grady Pierroz, Siwen Deng, Cheng Gao, Spencer Diamond, Tuesday Simmons, Heidi M.-L. Wipf, Daniel Caddell, Nelle Varoquaux, Mary A. Madera, Robert Hutmacher, Adam Deutschbauer, Jeffery A. Dahlberg, Mary Lou Guerinot, Elizabeth Purdom, Jillian F. Banfield, John W. Taylor, Peggy G. Lemaux, Devin Coleman-Derr

    Diterbitkan 2021-05-01
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  15. 15
    Cell Wall Compositions of Sorghum bicolor Leaves and Roots Remain Relatively Constant Under Drought Conditions

    Cell Wall Compositions of Sorghum bicolor Leaves and Roots Remain Relatively Constant Under Drought Conditions oleh Tess Scavuzzo-Duggan, Tess Scavuzzo-Duggan, Tess Scavuzzo-Duggan, Nelle Varoquaux, Nelle Varoquaux, Mary Madera, John P. Vogel, John P. Vogel, Jeffery Dahlberg, Robert Hutmacher, Michael Belcher, Michael Belcher, Michael Belcher, Jasmine Ortega, Jasmine Ortega, Devin Coleman-Derr, Devin Coleman-Derr, Peggy Lemaux, Elizabeth Purdom, Henrik V. Scheller, Henrik V. Scheller, Henrik V. Scheller

    Diterbitkan 2021-11-01
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  16. 16
    Transcriptional Programming of Normal and Inflamed Human Epidermis at Single-Cell Resolution

    Transcriptional Programming of Normal and Inflamed Human Epidermis at Single-Cell Resolution oleh Jeffrey B. Cheng, Andrew J. Sedgewick, Alex I. Finnegan, Paymann Harirchian, Jerry Lee, Sunjong Kwon, Marlys S. Fassett, Justin Golovato, Matthew Gray, Ruby Ghadially, Wilson Liao, Bethany E. Perez White, Theodora M. Mauro, Thaddeus Mully, Esther A. Kim, Hani Sbitany, Isaac M. Neuhaus, Roy C. Grekin, Siegrid S. Yu, Joe W. Gray, Elizabeth Purdom, Ralf Paus, Charles J. Vaske, Stephen C. Benz, Jun S. Song, Raymond J. Cho

    Diterbitkan 2018-10-01
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  17. 17
    Transcription Restores DNA Repair to Heterochromatin, Determining Regional Mutation Rates in Cancer Genomes

    Transcription Restores DNA Repair to Heterochromatin, Determining Regional Mutation Rates in Cancer Genomes oleh Christina L. Zheng, Nicholas J. Wang, Jongsuk Chung, Homayoun Moslehi, J. Zachary Sanborn, Joseph S. Hur, Eric A. Collisson, Swapna S. Vemula, Agne Naujokas, Kami E. Chiotti, Jeffrey B. Cheng, Hiva Fassihi, Andrew J. Blumberg, Celeste V. Bailey, Gary M. Fudem, Frederick G. Mihm, Bari B. Cunningham, Isaac M. Neuhaus, Wilson Liao, Dennis H. Oh, James E. Cleaver, Philip E. LeBoit, Joseph F. Costello, Alan R. Lehmann, Joe W. Gray, Paul T. Spellman, Sarah T. Arron, Nam Huh, Elizabeth Purdom, Raymond J. Cho

    Diterbitkan 2014-11-01
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