Hasil Pencarian - Cole Trapnell

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  1. 1
    Single-cell transcriptome sequencing: recent advances and remaining challenges [version 1; referees: 2 approved]

    Single-cell transcriptome sequencing: recent advances and remaining challenges [version 1; referees: 2 approved] oleh Serena Liu, Cole Trapnell

    Diterbitkan 2016-02-01
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  2. 2
    Extreme heterogeneity of influenza virus infection in single cells

    Extreme heterogeneity of influenza virus infection in single cells oleh Alistair B Russell, Cole Trapnell, Jesse D Bloom

    Diterbitkan 2018-02-01
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  3. 3
    Dimensionality reduction by UMAP to visualize physical and genetic interactions

    Dimensionality reduction by UMAP to visualize physical and genetic interactions oleh Michael W. Dorrity, Lauren M. Saunders, Christine Queitsch, Stanley Fields, Cole Trapnell

    Diterbitkan 2020-03-01
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  4. 4
    Nuclear oligo hashing improves differential analysis of single-cell RNA-seq

    Nuclear oligo hashing improves differential analysis of single-cell RNA-seq oleh Hyeon-Jin Kim, Greg Booth, Lauren Saunders, Sanjay Srivatsan, José L. McFaline-Figueroa, Cole Trapnell

    Diterbitkan 2022-05-01
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  5. 5
    Single-cell transcriptomic profiling of the zebrafish inner ear reveals molecularly distinct hair cell and supporting cell subtypes

    Single-cell transcriptomic profiling of the zebrafish inner ear reveals molecularly distinct hair cell and supporting cell subtypes oleh Tuo Shi, Marielle O Beaulieu, Lauren M Saunders, Peter Fabian, Cole Trapnell, Neil Segil, J Gage Crump, David W Raible

    Diterbitkan 2023-01-01
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  6. 6
    Wnt Signaling Separates the Progenitor and Endocrine Compartments during Pancreas Development

    Wnt Signaling Separates the Progenitor and Endocrine Compartments during Pancreas Development oleh Nadav Sharon, Jordan Vanderhooft, Juerg Straubhaar, Jonas Mueller, Raghav Chawla, Quan Zhou, Elise N. Engquist, Cole Trapnell, David K. Gifford, Douglas A. Melton

    Diterbitkan 2019-05-01
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  7. 7
    Binding site turnover produces pervasive quantitative changes in transcription factor binding between closely related Drosophila species.

    Binding site turnover produces pervasive quantitative changes in transcription factor binding between closely related Drosophila species. oleh Robert K Bradley, Xiao-Yong Li, Cole Trapnell, Stuart Davidson, Lior Pachter, Hou Cheng Chu, Leath A Tonkin, Mark D Biggin, Michael B Eisen

    Diterbitkan 2010-03-01
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  8. 8
    Transcriptomic profiling of tissue environments critical for post-embryonic patterning and morphogenesis of zebrafish skin

    Transcriptomic profiling of tissue environments critical for post-embryonic patterning and morphogenesis of zebrafish skin oleh Andrew J Aman, Lauren M Saunders, August A Carr, Sanjay Srivatasan, Colten Eberhard, Blake Carrington, Dawn Watkins-Chow, William J Pavan, Cole Trapnell, David M Parichy

    Diterbitkan 2023-09-01
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  9. 9
    High-capacity sample multiplexing for single cell chromatin accessibility profiling

    High-capacity sample multiplexing for single cell chromatin accessibility profiling oleh Gregory T. Booth, Riza M. Daza, Sanjay R. Srivatsan, José L. McFaline-Figueroa, Rula Green Gladden, Andrew C. Mullen, Scott N. Furlan, Jay Shendure, Cole Trapnell

    Diterbitkan 2023-12-01
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  10. 10
    Airway epithelial interferon response to SARS-CoV-2 is inferior to rhinovirus and heterologous rhinovirus infection suppresses SARS-CoV-2 replication

    Airway epithelial interferon response to SARS-CoV-2 is inferior to rhinovirus and heterologous rhinovirus infection suppresses SARS-CoV-2 replication oleh Elizabeth R. Vanderwall, Kaitlyn A. Barrow, Lucille M. Rich, David F. Read, Cole Trapnell, Oghenemega Okoloko, Steven F. Ziegler, Teal S. Hallstrand, Maria P. White, Jason S. Debley

    Diterbitkan 2022-04-01
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  11. 11
    Single-cell landscape of nuclear configuration and gene expression during stem cell differentiation and X inactivation

    Single-cell landscape of nuclear configuration and gene expression during stem cell differentiation and X inactivation oleh Giancarlo Bonora, Vijay Ramani, Ritambhara Singh, He Fang, Dana L. Jackson, Sanjay Srivatsan, Ruolan Qiu, Choli Lee, Cole Trapnell, Jay Shendure, Zhijun Duan, Xinxian Deng, William S. Noble, Christine M. Disteche

    Diterbitkan 2021-09-01
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  12. 12
    Single-Cell Transcriptomic Comparison of Human Fetal Retina, hPSC-Derived Retinal Organoids, and Long-Term Retinal Cultures

    Single-Cell Transcriptomic Comparison of Human Fetal Retina, hPSC-Derived Retinal Organoids, and Long-Term Retinal Cultures oleh Akshayalakshmi Sridhar, Akina Hoshino, Connor R. Finkbeiner, Alex Chitsazan, Li Dai, Alexandra K. Haugan, Kayla M. Eschenbacher, Dana L. Jackson, Cole Trapnell, Olivia Bermingham-McDonogh, Ian Glass, Thomas A. Reh

    Diterbitkan 2020-02-01
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  13. 13
    Targeting TWIST1 through loss of function inhibits tumorigenicity of human glioblastoma

    Targeting TWIST1 through loss of function inhibits tumorigenicity of human glioblastoma oleh Andrei M. Mikheev, Svetlana A. Mikheeva, Liza J. Severs, Cory C. Funk, Lei Huang, José L. McFaline‐Figueroa, Jeanette Schwensen, Cole Trapnell, Nathan D. Price, Stephen Wong, Robert C. Rostomily

    Diterbitkan 2018-06-01
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  14. 14
    High‐throughput, microscope‐based sorting to dissect cellular heterogeneity

    High‐throughput, microscope‐based sorting to dissect cellular heterogeneity oleh Nicholas Hasle, Anthony Cooke, Sanjay Srivatsan, Heather Huang, Jason J Stephany, Zachary Krieger, Dana Jackson, Weiliang Tang, Sriram Pendyala, Raymond J Monnat Jr., Cole Trapnell, Emily M Hatch, Douglas M Fowler

    Diterbitkan 2020-06-01
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  15. 15
    Thyroid hormone regulates distinct paths to maturation in pigment cell lineages

    Thyroid hormone regulates distinct paths to maturation in pigment cell lineages oleh Lauren M Saunders, Abhishek K Mishra, Andrew J Aman, Victor M Lewis, Matthew B Toomey, Jonathan S Packer, Xiaojie Qiu, Jose L McFaline-Figueroa, Joseph C Corbo, Cole Trapnell, David M Parichy

    Diterbitkan 2019-05-01
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  16. 16
    Engineering a niche supporting hematopoietic stem cell development using integrated single-cell transcriptomics

    Engineering a niche supporting hematopoietic stem cell development using integrated single-cell transcriptomics oleh Brandon Hadland, Barbara Varnum-Finney, Stacey Dozono, Tessa Dignum, Cynthia Nourigat-McKay, Adam M. Heck, Takashi Ishida, Dana L. Jackson, Tomer Itkin, Jason M. Butler, Shahin Rafii, Cole Trapnell, Irwin D. Bernstein

    Diterbitkan 2022-03-01
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  17. 17
    Multipotent progenitors and hematopoietic stem cells arise independently from hemogenic endothelium in the mouse embryo

    Multipotent progenitors and hematopoietic stem cells arise independently from hemogenic endothelium in the mouse embryo oleh Tessa Dignum, Barbara Varnum-Finney, Sanjay R. Srivatsan, Stacey Dozono, Olivia Waltner, Adam M. Heck, Takashi Ishida, Cynthia Nourigat-McKay, Dana L. Jackson, Shahin Rafii, Cole Trapnell, Irwin D. Bernstein, Brandon Hadland

    Diterbitkan 2021-09-01
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  18. 18
    Neural G0: a quiescent‐like state found in neuroepithelial‐derived cells and glioma

    Neural G0: a quiescent‐like state found in neuroepithelial‐derived cells and glioma oleh Samantha A O’Connor, Heather M Feldman, Sonali Arora, Pia Hoellerbauer, Chad M Toledo, Philip Corrin, Lucas Carter, Megan Kufeld, Hamid Bolouri, Ryan Basom, Jeffrey Delrow, José L McFaline‐Figueroa, Cole Trapnell, Steven M Pollard, Anoop Patel, Patrick J Paddison, Christopher L Plaisier

    Diterbitkan 2021-06-01
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  19. 19
    iPSC-Derived Macrophages Effectively Treat Pulmonary Alveolar Proteinosis in Csf2rb-Deficient Mice

    iPSC-Derived Macrophages Effectively Treat Pulmonary Alveolar Proteinosis in Csf2rb-Deficient Mice oleh Adele Mucci, Elena Lopez-Rodriguez, Miriam Hetzel, Serena Liu, Takuji Suzuki, Christine Happle, Mania Ackermann, Henning Kempf, Roman Hillje, Jessica Kunkiel, Ewa Janosz, Sebastian Brennig, Silke Glage, Jens P. Bankstahl, Sabine Dettmer, Thomas Rodt, Gudrun Gohring, Bruce Trapnell, Gesine Hansen, Cole Trapnell, Lars Knudsen, Nico Lachmann, Thomas Moritz

    Diterbitkan 2018-09-01
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  20. 20
    Predicting cellular responses to complex perturbations in high‐throughput screens

    Predicting cellular responses to complex perturbations in high‐throughput screens oleh Mohammad Lotfollahi, Anna Klimovskaia Susmelj, Carlo De Donno, Leon Hetzel, Yuge Ji, Ignacio L Ibarra, Sanjay R Srivatsan, Mohsen Naghipourfar, Riza M Daza, Beth Martin, Jay Shendure, Jose L McFaline‐Figueroa, Pierre Boyeau, F Alexander Wolf, Nafissa Yakubova, Stephan Günnemann, Cole Trapnell, David Lopez‐Paz, Fabian J Theis

    Diterbitkan 2023-06-01
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