Hasil Pencarian - Amarda Shehu

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  1. 1
    From Extraction of Local Structures of Protein Energy Landscapes to Improved Decoy Selection in Template-Free Protein Structure Prediction

    From Extraction of Local Structures of Protein Energy Landscapes to Improved Decoy Selection in Template-Free Protein Structure Prediction oleh Nasrin Akhter, Amarda Shehu

    Diterbitkan 2018-01-01
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  2. 2
    Computational Methods for Exploration and Analysis of Macromolecular Structure and Dynamics.

    Computational Methods for Exploration and Analysis of Macromolecular Structure and Dynamics. oleh Amarda Shehu, Ruth Nussinov

    Diterbitkan 2015-10-01
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  3. 3
    GOProFormer: A Multi-Modal Transformer Method for Gene Ontology Protein Function Prediction

    GOProFormer: A Multi-Modal Transformer Method for Gene Ontology Protein Function Prediction oleh Anowarul Kabir, Amarda Shehu

    Diterbitkan 2022-11-01
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  4. 4
    Balancing multiple objectives in conformation sampling to control decoy diversity in template-free protein structure prediction

    Balancing multiple objectives in conformation sampling to control decoy diversity in template-free protein structure prediction oleh Ahmed Bin Zaman, Amarda Shehu

    Diterbitkan 2019-04-01
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  5. 5
    Data Size and Quality Matter: Generating Physically-Realistic Distance Maps of Protein Tertiary Structures

    Data Size and Quality Matter: Generating Physically-Realistic Distance Maps of Protein Tertiary Structures oleh Fardina Fathmiul Alam, Amarda Shehu

    Diterbitkan 2022-06-01
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  6. 6
    Modeling Structures and Motions of Loops in Protein Molecules

    Modeling Structures and Motions of Loops in Protein Molecules oleh Lydia E. Kavraki, Amarda Shehu

    Diterbitkan 2012-02-01
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  7. 7
    An Energy Landscape Treatment of Decoy Selection in Template-Free Protein Structure Prediction

    An Energy Landscape Treatment of Decoy Selection in Template-Free Protein Structure Prediction oleh Nasrin Akhter, Wanli Qiao, Amarda Shehu

    Diterbitkan 2018-06-01
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  8. 8
    Elucidating the Role of Wildtype and Variant FGFR2 Structural Dynamics in (Dys)Function and Disorder

    Elucidating the Role of Wildtype and Variant FGFR2 Structural Dynamics in (Dys)Function and Disorder oleh Yiyang Lian, Dale Bodian, Amarda Shehu

    Diterbitkan 2024-04-01
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  9. 9
    Computing the Structural Dynamics of RVFV L Protein Domain in Aqueous Glycerol Solutions

    Computing the Structural Dynamics of RVFV L Protein Domain in Aqueous Glycerol Solutions oleh Gideon K. Gogovi, Swabir Silayi, Amarda Shehu

    Diterbitkan 2021-09-01
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  10. 10
    Effective automated feature construction and selection for classification of biological sequences.

    Effective automated feature construction and selection for classification of biological sequences. oleh Uday Kamath, Kenneth De Jong, Amarda Shehu

    Diterbitkan 2014-01-01
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  11. 11
    Evaluating Autoencoder-Based Featurization and Supervised Learning for Protein Decoy Selection

    Evaluating Autoencoder-Based Featurization and Supervised Learning for Protein Decoy Selection oleh Fardina Fathmiul Alam, Taseef Rahman, Amarda Shehu

    Diterbitkan 2020-03-01
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  12. 12
    Attenuating dependence on structural data in computing protein energy landscapes

    Attenuating dependence on structural data in computing protein energy landscapes oleh David Morris, Tatiana Maximova, Erion Plaku, Amarda Shehu

    Diterbitkan 2019-06-01
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  13. 13
    Generative Adversarial Learning of Protein Tertiary Structures

    Generative Adversarial Learning of Protein Tertiary Structures oleh Taseef Rahman, Yuanqi Du, Liang Zhao, Amarda Shehu

    Diterbitkan 2021-02-01
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  14. 14
    Decoy selection for protein structure prediction via extreme gradient boosting and ranking

    Decoy selection for protein structure prediction via extreme gradient boosting and ranking oleh Nasrin Akhter, Gopinath Chennupati, Hristo Djidjev, Amarda Shehu

    Diterbitkan 2020-12-01
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  15. 15
    Mapping the Conformation Space of Wildtype and Mutant H-Ras with a Memetic, Cellular, and Multiscale Evolutionary Algorithm.

    Mapping the Conformation Space of Wildtype and Mutant H-Ras with a Memetic, Cellular, and Multiscale Evolutionary Algorithm. oleh Rudy Clausen, Buyong Ma, Ruth Nussinov, Amarda Shehu

    Diterbitkan 2015-09-01
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  16. 16
    Fewer Dimensions, More Structures for Improved Discrete Models of Dynamics of Free versus Antigen-Bound Antibody

    Fewer Dimensions, More Structures for Improved Discrete Models of Dynamics of Free versus Antigen-Bound Antibody oleh Kazi Lutful Kabir, Buyong Ma, Ruth Nussinov, Amarda Shehu

    Diterbitkan 2022-07-01
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  17. 17
    Computational Structural Biology: Successes, Future Directions, and Challenges

    Computational Structural Biology: Successes, Future Directions, and Challenges oleh Ruth Nussinov, Chung-Jung Tsai, Amarda Shehu, Hyunbum Jang

    Diterbitkan 2019-02-01
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  18. 18
    Reducing Ensembles of Protein Tertiary Structures Generated De Novo via Clustering

    Reducing Ensembles of Protein Tertiary Structures Generated De Novo via Clustering oleh Ahmed Bin Zaman, Parastoo Kamranfar, Carlotta Domeniconi, Amarda Shehu

    Diterbitkan 2020-05-01
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  19. 19
    Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics.

    Principles and Overview of Sampling Methods for Modeling Macromolecular Structure and Dynamics. oleh Tatiana Maximova, Ryan Moffatt, Buyong Ma, Ruth Nussinov, Amarda Shehu

    Diterbitkan 2016-04-01
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  20. 20
    Graph-Based Community Detection for Decoy Selection in Template-Free Protein Structure Prediction

    Graph-Based Community Detection for Decoy Selection in Template-Free Protein Structure Prediction oleh Kazi Lutful Kabir, Liban Hassan, Zahra Rajabi, Nasrin Akhter, Amarda Shehu

    Diterbitkan 2019-02-01
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