Hasil Pencarian - Altuna Akalin

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  1. 1
    netSmooth: Network-smoothing based imputation for single cell RNA-seq [version 2; referees: 2 approved]

    netSmooth: Network-smoothing based imputation for single cell RNA-seq [version 2; referees: 2 approved] oleh Jonathan Ronen, Altuna Akalin

    Diterbitkan 2018-01-01
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  2. 2
    netSmooth: Network-smoothing based imputation for single cell RNA-seq [version 3; referees: 2 approved]

    netSmooth: Network-smoothing based imputation for single cell RNA-seq [version 3; referees: 2 approved] oleh Jonathan Ronen, Altuna Akalin

    Diterbitkan 2018-07-01
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  3. 3
    scMaui: a widely applicable deep learning framework for single-cell multiomics integration in the presence of batch effects and missing data

    scMaui: a widely applicable deep learning framework for single-cell multiomics integration in the presence of batch effects and missing data oleh Yunhee Jeong, Jonathan Ronen, Wolfgang Kopp, Pavlo Lutsik, Altuna Akalin

    Diterbitkan 2024-08-01
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  4. 4
    Deep learning for genomics using Janggu

    Deep learning for genomics using Janggu oleh Wolfgang Kopp, Remo Monti, Annalaura Tamburrini, Uwe Ohler, Altuna Akalin

    Diterbitkan 2020-07-01
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  5. 5
    Identifying tumor cells at the single-cell level using machine learning

    Identifying tumor cells at the single-cell level using machine learning oleh Jan Dohmen, Artem Baranovskii, Jonathan Ronen, Bora Uyar, Vedran Franke, Altuna Akalin

    Diterbitkan 2022-05-01
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  6. 6
    Nuclear Organization in the Spinal Cord Depends on Motor Neuron Lamination Orchestrated by Catenin and Afadin Function

    Nuclear Organization in the Spinal Cord Depends on Motor Neuron Lamination Orchestrated by Catenin and Afadin Function oleh Carola Dewitz, Sofia Pimpinella, Patrick Hackel, Altuna Akalin, Thomas M. Jessell, Niccolò Zampieri

    Diterbitkan 2018-02-01
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  7. 7
    Global identification of functional microRNA-mRNA interactions in Drosophila

    Global identification of functional microRNA-mRNA interactions in Drosophila oleh Hans-Hermann Wessels, Svetlana Lebedeva, Antje Hirsekorn, Ricardo Wurmus, Altuna Akalin, Neelanjan Mukherjee, Uwe Ohler

    Diterbitkan 2019-04-01
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  8. 8
    Parallel genetics of regulatory sequences using scalable genome editing in vivo

    Parallel genetics of regulatory sequences using scalable genome editing in vivo oleh Jonathan J. Froehlich, Bora Uyar, Margareta Herzog, Kathrin Theil, Petar Glažar, Altuna Akalin, Nikolaus Rajewsky

    Diterbitkan 2021-04-01
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  9. 9
    Single-nucleus transcriptomics reveals functional compartmentalization in syncytial skeletal muscle cells

    Single-nucleus transcriptomics reveals functional compartmentalization in syncytial skeletal muscle cells oleh Minchul Kim, Vedran Franke, Bettina Brandt, Elijah D. Lowenstein, Verena Schöwel, Simone Spuler, Altuna Akalin, Carmen Birchmeier

    Diterbitkan 2020-12-01
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  10. 10
    Pathogenic mutations of human phosphorylation sites affect protein–protein interactions

    Pathogenic mutations of human phosphorylation sites affect protein–protein interactions oleh Trendelina Rrustemi, Katrina Meyer, Yvette Roske, Bora Uyar, Altuna Akalin, Koshi Imami, Yasushi Ishihama, Oliver Daumke, Matthias Selbach

    Diterbitkan 2024-04-01
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  11. 11
    Dissecting the transcriptional regulatory properties of human chromosome 16 highly conserved non-coding regions.

    Dissecting the transcriptional regulatory properties of human chromosome 16 highly conserved non-coding regions. oleh José Luis Royo, Carmen Hidalgo, Yolanda Roncero, María Angeles Seda, Altuna Akalin, Boris Lenhard, Fernando Casares, José Luis Gómez-Skarmeta

    Diterbitkan 2011-01-01
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  12. 12
    Single-cell RNA-sequencing of herpes simplex virus 1-infected cells connects NRF2 activation to an antiviral program

    Single-cell RNA-sequencing of herpes simplex virus 1-infected cells connects NRF2 activation to an antiviral program oleh Emanuel Wyler, Vedran Franke, Jennifer Menegatti, Christine Kocks, Anastasiya Boltengagen, Samantha Praktiknjo, Barbara Walch-Rückheim, Jens Bosse, Nikolaus Rajewsky, Friedrich Grässer, Altuna Akalin, Markus Landthaler

    Diterbitkan 2019-10-01
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  13. 13
    The SPOC proteins DIDO3 and PHF3 co-regulate gene expression and neuronal differentiation

    The SPOC proteins DIDO3 and PHF3 co-regulate gene expression and neuronal differentiation oleh Johannes Benedum, Vedran Franke, Lisa-Marie Appel, Lena Walch, Melania Bruno, Rebecca Schneeweiss, Juliane Gruber, Helena Oberndorfer, Emma Frank, Xué Strobl, Anton Polyansky, Bojan Zagrovic, Altuna Akalin, Dea Slade

    Diterbitkan 2023-11-01
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  14. 14
    Predicting lethal courses in critically ill COVID-19 patients using a machine learning model trained on patients with non-COVID-19 viral pneumonia

    Predicting lethal courses in critically ill COVID-19 patients using a machine learning model trained on patients with non-COVID-19 viral pneumonia oleh Gregor Lichtner, Felix Balzer, Stefan Haufe, Niklas Giesa, Fridtjof Schiefenhövel, Malte Schmieding, Carlo Jurth, Wolfgang Kopp, Altuna Akalin, Stefan J. Schaller, Steffen Weber-Carstens, Claudia Spies, Falk von Dincklage

    Diterbitkan 2021-06-01
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  15. 15
    Disintegration of the NuRD Complex in Primary Human Muscle Stem Cells in Critical Illness Myopathy

    Disintegration of the NuRD Complex in Primary Human Muscle Stem Cells in Critical Illness Myopathy oleh Joanna Schneider, Devakumar Sundaravinayagam, Alexander Blume, Andreas Marg, Stefanie Grunwald, Eric Metzler, Helena Escobar, Stefanie Müthel, Haicui Wang, Tobias Wollersheim, Steffen Weber-Carstens, Altuna Akalin, Michela Di Virgilio, Baris Tursun, Simone Spuler

    Diterbitkan 2023-02-01
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  16. 16
    Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection

    Widespread activation of antisense transcription of the host genome during herpes simplex virus 1 infection oleh Emanuel Wyler, Jennifer Menegatti, Vedran Franke, Christine Kocks, Anastasiya Boltengagen, Thomas Hennig, Kathrin Theil, Andrzej Rutkowski, Carmelo Ferrai, Laura Baer, Lisa Kermas, Caroline Friedel, Nikolaus Rajewsky, Altuna Akalin, Lars Dölken, Friedrich Grässer, Markus Landthaler

    Diterbitkan 2017-10-01
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  17. 17
    The SPOC domain is a phosphoserine binding module that bridges transcription machinery with co- and post-transcriptional regulators

    The SPOC domain is a phosphoserine binding module that bridges transcription machinery with co- and post-transcriptional regulators oleh Lisa-Marie Appel, Vedran Franke, Johannes Benedum, Irina Grishkovskaya, Xué Strobl, Anton Polyansky, Gregor Ammann, Sebastian Platzer, Andrea Neudolt, Anna Wunder, Lena Walch, Stefanie Kaiser, Bojan Zagrovic, Kristina Djinovic-Carugo, Altuna Akalin, Dea Slade

    Diterbitkan 2023-01-01
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  18. 18
    Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos

    Single-cell-resolved dynamics of chromatin architecture delineate cell and regulatory states in zebrafish embryos oleh Alison C. McGarvey, Wolfgang Kopp, Dubravka Vučićević, Kenny Mattonet, Rieke Kempfer, Antje Hirsekorn, Ilija Bilić, Marine Gil, Alexandra Trinks, Anne Margarete Merks, Daniela Panáková, Ana Pombo, Altuna Akalin, Jan Philipp Junker, Didier Y.R. Stainier, David Garfield, Uwe Ohler, Scott Allen Lacadie

    Diterbitkan 2022-01-01
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  19. 19
    RNA localization is a key determinant of neurite-enriched proteome

    RNA localization is a key determinant of neurite-enriched proteome oleh Alessandra Zappulo, David van den Bruck, Camilla Ciolli Mattioli, Vedran Franke, Koshi Imami, Erik McShane, Mireia Moreno-Estelles, Lorenzo Calviello, Andrei Filipchyk, Esteban Peguero-Sanchez, Thomas Müller, Andrew Woehler, Carmen Birchmeier, Enrique Merino, Nikolaus Rajewsky, Uwe Ohler, Esteban O. Mazzoni, Matthias Selbach, Altuna Akalin, Marina Chekulaeva

    Diterbitkan 2017-09-01
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  20. 20
    PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC

    PHF3 regulates neuronal gene expression through the Pol II CTD reader domain SPOC oleh Lisa-Marie Appel, Vedran Franke, Melania Bruno, Irina Grishkovskaya, Aiste Kasiliauskaite, Tanja Kaufmann, Ursula E. Schoeberl, Martin G. Puchinger, Sebastian Kostrhon, Carmen Ebenwaldner, Marek Sebesta, Etienne Beltzung, Karl Mechtler, Gen Lin, Anna Vlasova, Martin Leeb, Rushad Pavri, Alexander Stark, Altuna Akalin, Richard Stefl, Carrie Bernecky, Kristina Djinovic-Carugo, Dea Slade

    Diterbitkan 2021-10-01
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