Hasil Pencarian - Alexis Battle

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  1. 1
    False positives in trans-eQTL and co-expression analyses arising from RNA-sequencing alignment errors [version 2; peer review: 3 approved]

    False positives in trans-eQTL and co-expression analyses arising from RNA-sequencing alignment errors [version 2; peer review: 3 approved] oleh Ashis Saha, Alexis Battle

    Diterbitkan 2019-04-01
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  2. 2
    False positives in trans-eQTL and co-expression analyses arising from RNA-sequencing alignment errors [version 1; referees: 2 approved]

    False positives in trans-eQTL and co-expression analyses arising from RNA-sequencing alignment errors [version 1; referees: 2 approved] oleh Ashis Saha, Alexis Battle

    Diterbitkan 2018-11-01
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  3. 3
    Bayesian Multi-View Clustering given complex inter-view structure [version 2; peer review: 2 approved]

    Bayesian Multi-View Clustering given complex inter-view structure [version 2; peer review: 2 approved] oleh Benjamin D. Shapiro, Alexis Battle

    Diterbitkan 2024-02-01
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  4. 4
    Automated identification of pathways from quantitative genetic interaction data

    Automated identification of pathways from quantitative genetic interaction data oleh Alexis Battle, Martin C Jonikas, Peter Walter, Jonathan S Weissman, Daphne Koller

    Diterbitkan 2010-01-01
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  5. 5
    Aggregative trans-eQTL analysis detects trait-specific target gene sets in whole blood

    Aggregative trans-eQTL analysis detects trait-specific target gene sets in whole blood oleh Diptavo Dutta, Yuan He, Ashis Saha, Marios Arvanitis, Alexis Battle, Nilanjan Chatterjee

    Diterbitkan 2022-07-01
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  6. 6
    Identifying global expression patterns and key regulators in epithelial to mesenchymal transition through multi-study integration

    Identifying global expression patterns and key regulators in epithelial to mesenchymal transition through multi-study integration oleh Princy Parsana, Sarah R. Amend, James Hernandez, Kenneth J. Pienta, Alexis Battle

    Diterbitkan 2017-06-01
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  7. 7
    High-resolution transcriptome analysis with long-read RNA sequencing.

    High-resolution transcriptome analysis with long-read RNA sequencing. oleh Hyunghoon Cho, Joe Davis, Xin Li, Kevin S Smith, Alexis Battle, Stephen B Montgomery

    Diterbitkan 2014-01-01
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  8. 8
    Addressing confounding artifacts in reconstruction of gene co-expression networks

    Addressing confounding artifacts in reconstruction of gene co-expression networks oleh Princy Parsana, Claire Ruberman, Andrew E. Jaffe, Michael C. Schatz, Alexis Battle, Jeffrey T. Leek

    Diterbitkan 2019-05-01
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  9. 9
    Single-cell allele-specific expression analysis reveals dynamic and cell-type-specific regulatory effects

    Single-cell allele-specific expression analysis reveals dynamic and cell-type-specific regulatory effects oleh Guanghao Qi, Benjamin J. Strober, Joshua M. Popp, Rebecca Keener, Hongkai Ji, Alexis Battle

    Diterbitkan 2023-10-01
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  10. 10
    Genome-wide large-scale multi-trait analysis characterizes global patterns of pleiotropy and unique trait-specific variants

    Genome-wide large-scale multi-trait analysis characterizes global patterns of pleiotropy and unique trait-specific variants oleh Guanghao Qi, Surya B. Chhetri, Debashree Ray, Diptavo Dutta, Alexis Battle, Samsiddhi Bhattacharjee, Nilanjan Chatterjee

    Diterbitkan 2024-08-01
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  11. 11
    Human embryoid bodies as a novel system for genomic studies of functionally diverse cell types

    Human embryoid bodies as a novel system for genomic studies of functionally diverse cell types oleh Katherine Rhodes, Kenneth A Barr, Joshua M Popp, Benjamin J Strober, Alexis Battle, Yoav Gilad

    Diterbitkan 2022-02-01
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  12. 12
    Normalizing RNA-sequencing data by modeling hidden covariates with prior knowledge.

    Normalizing RNA-sequencing data by modeling hidden covariates with prior knowledge. oleh Sara Mostafavi, Alexis Battle, Xiaowei Zhu, Alexander E Urban, Douglas Levinson, Stephen B Montgomery, Daphne Koller

    Diterbitkan 2013-01-01
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  13. 13
    GBAT: a gene-based association test for robust detection of trans-gene regulation

    GBAT: a gene-based association test for robust detection of trans-gene regulation oleh Xuanyao Liu, Joel A. Mefford, Andrew Dahl, Yuan He, Meena Subramaniam, Alexis Battle, Alkes L. Price, Noah Zaitlen

    Diterbitkan 2020-08-01
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  14. 14
    Single-cell sequencing reveals lineage-specific dynamic genetic regulation of gene expression during human cardiomyocyte differentiation.

    Single-cell sequencing reveals lineage-specific dynamic genetic regulation of gene expression during human cardiomyocyte differentiation. oleh Reem Elorbany, Joshua M Popp, Katherine Rhodes, Benjamin J Strober, Kenneth Barr, Guanghao Qi, Yoav Gilad, Alexis Battle

    Diterbitkan 2022-01-01
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  15. 15
    SURGE: uncovering context-specific genetic-regulation of gene expression from single-cell RNA sequencing using latent-factor models

    SURGE: uncovering context-specific genetic-regulation of gene expression from single-cell RNA sequencing using latent-factor models oleh Benjamin J. Strober, Karl Tayeb, Joshua Popp, Guanghao Qi, M. Grace Gordon, Richard Perez, Chun Jimmie Ye, Alexis Battle

    Diterbitkan 2024-01-01
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  16. 16
    Transcriptome analysis reveals differential splicing events in IPF lung tissue.

    Transcriptome analysis reveals differential splicing events in IPF lung tissue. oleh Tracy Nance, Kevin S Smith, Vanessa Anaya, Rhea Richardson, Lawrence Ho, Mauro Pala, Sara Mostafavi, Alexis Battle, Carol Feghali-Bostwick, Glenn Rosen, Stephen B Montgomery

    Diterbitkan 2014-01-01
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  17. 17
    Sharing and Specificity of Co-expression Networks across 35 Human Tissues.

    Sharing and Specificity of Co-expression Networks across 35 Human Tissues. oleh Emma Pierson, GTEx Consortium, Daphne Koller, Alexis Battle, Sara Mostafavi, Kristin G Ardlie, Gad Getz, Fred A Wright, Manolis Kellis, Simona Volpi, Emmanouil T Dermitzakis

    Diterbitkan 2015-05-01
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  18. 18
    Transcriptome analysis reveals differential splicing events in IPF lung tissue.

    Transcriptome analysis reveals differential splicing events in IPF lung tissue. oleh Tracy Nance, Kevin S Smith, Vanessa Anaya, Rhea Richardson, Lawrence Ho, Mauro Pala, Sara Mostafavi, Alexis Battle, Carol Feghali-Bostwick, Glenn Rosen, Stephen B Montgomery

    Diterbitkan 2014-01-01
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  19. 19
    OTTERS: a powerful TWAS framework leveraging summary-level reference data

    OTTERS: a powerful TWAS framework leveraging summary-level reference data oleh Qile Dai, Geyu Zhou, Hongyu Zhao, Urmo Võsa, Lude Franke, Alexis Battle, Alexander Teumer, Terho Lehtimäki, Olli T. Raitakari, Tõnu Esko, eQTLGen Consortium, Michael P. Epstein, Jingjing Yang

    Diterbitkan 2023-03-01
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  20. 20
    sn-spMF: matrix factorization informs tissue-specific genetic regulation of gene expression

    sn-spMF: matrix factorization informs tissue-specific genetic regulation of gene expression oleh Yuan He, Surya B. Chhetri, Marios Arvanitis, Kaushik Srinivasan, François Aguet, Kristin G. Ardlie, Alvaro N. Barbeira, Rodrigo Bonazzola, Hae Kyung Im, GTEx Consortium, Christopher D. Brown, Alexis Battle

    Diterbitkan 2020-09-01
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