IGFBP2 Is a Potential Master Regulator Driving the Dysregulated Gene Network Responsible for Short Survival in Glioblastoma Multiforme by Manasa Kalya, Manasa Kalya, Alexander Kel, Alexander Kel, Darius Wlochowitz, Edgar Wingender, Tim Beißbarth

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A discriminative approach for unsupervised clustering of DNA sequence motifs. by Philip Stegmaier, Alexander Kel, Edgar Wingender, Jürgen Borlak

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ErbB4 Is a Potential Key Regulator of the Pathways Activated by NTRK-Fusions in Thyroid Cancer by Andrey Kechin, Viktoriya Borobova, Alexander Kel, Anatoliy Ivanov, Maxim Filipenko

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Nucleotide patterns aiding in prediction of eukaryotic promoters. by Martin Triska, Victor Solovyev, Ancha Baranova, Alexander Kel, Tatiana V Tatarinova

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Advanced computational biology methods identify molecular switches for malignancy in an EGF mouse model of liver cancer. by Philip Stegmaier, Nico Voss, Tatiana Meier, Alexander Kel, Edgar Wingender, Juergen Borlak

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Phenotypic selection through cell death: stochastic modelling of O-6-methylguanine-DNA methyltransferase dynamics by Ayoub Lasri, Viktorija Juric, Maité Verreault, Franck Bielle, Ahmed Idbaih, Alexander Kel, Brona Murphy, Marc Sturrock

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Computational master-regulator search reveals mTOR and PI3K pathways responsible for low sensitivity of NCI-H292 and A427 lung cancer cell lines to cytotoxic action of p53 activato... by Ulyana Boyarskikh, Sergey Pintus, Nikita Mandrik, Daria Stelmashenko, Ilya Kiselev, Ivan Evshin, Ruslan Sharipov, Philip Stegmaier, Fedor Kolpakov, Maxim Filipenko, Alexander Kel

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Master Transcription Regulators and Transcription Factors Regulate Immune-Associated Differences Between Patients of African and European Ancestry With Colorectal Cancer by Parvathi A. Myer, Hyunjin Kim, Anna M. Blümel, Ellen Finnegan, Alexander Kel, Taylor V. Thompson, John M. Greally, Jochen HM. Prehn, Darran P. O’Connor, Richard A. Friedman, Aris Floratos, Sudipto Das

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Walking pathways with positive feedback loops reveal DNA methylation biomarkers of colorectal cancer by Alexander Kel, Ulyana Boyarskikh, Philip Stegmaier, Leonid S. Leskov, Andrey V. Sokolov, Ivan Yevshin, Nikita Mandrik, Daria Stelmashenko, Jeannette Koschmann, Olga Kel-Margoulis, Mathias Krull, Anna Martínez-Cardús, Sebastian Moran, Manel Esteller, Fedor Kolpakov, Maxim Filipenko, Edgar Wingender

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Signaling Pathways Potentially Responsible for Foam Cell Formation: Cholesterol Accumulation or Inflammatory Response—What is First? by Alexander N. Orekhov, Vasily N. Sukhorukov, Nikita G. Nikiforov, Marina V. Kubekina, Igor A. Sobenin, Kathy K. Foxx, Sergey Pintus, Philip Stegmaier, Daria Stelmashenko, Alexander Kel, Anastasia V. Poznyak, Wei-Kai Wu, Artem S. Kasianov, Vsevolod Y. Makeev, Ichiro Manabe, Yumiko Oishi

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Role of Phagocytosis in the Pro-Inflammatory Response in LDL-Induced Foam Cell Formation; a Transcriptome Analysis by Alexander N. Orekhov, Nikita G. Nikiforov, Vasily N. Sukhorukov, Marina V. Kubekina, Igor A. Sobenin, Wei-Kai Wu, Kathy K. Foxx, Sergey Pintus, Philip Stegmaier, Daria Stelmashenko, Alexander Kel, Alexei N. Gratchev, Alexandra A. Melnichenko, Reinhard Wetzker, Volha I. Summerhill, Ichiro Manabe, Yumiko Oishi

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Using systems medicine to identify a therapeutic agent with potential for repurposing in inflammatory bowel disease by Katie Lloyd, Stamatia Papoutsopoulou, Emily Smith, Philip Stegmaier, Francois Bergey, Lorna Morris, Madeleine Kittner, Hazel England, Dave Spiller, Mike H. R. White, Carrie A. Duckworth, Barry J. Campbell, Vladimir Poroikov, Vitor A. P. Martins dos Santos, Alexander Kel, Werner Muller, D. Mark Pritchard, Chris Probert, Michael D. Burkitt, The SysmedIBD Consortium

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An integrative proteomics method identifies a regulator of translation during stem cell maintenance and differentiation by Pierre Sabatier, Christian M. Beusch, Amir A. Saei, Mike Aoun, Noah Moruzzi, Ana Coelho, Niels Leijten, Magnus Nordenskjöld, Patrick Micke, Diana Maltseva, Alexander G. Tonevitsky, Vincent Millischer, J. Carlos Villaescusa, Sandeep Kadekar, Massimiliano Gaetani, Kamilya Altynbekova, Alexander Kel, Per-Olof Berggren, Oscar Simonson, Karl-Henrik Grinnemo, Rikard Holmdahl, Sergey Rodin, Roman A. Zubarev

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