Hasil Pencarian - Joshua M Stuart

Perbaiki Hasil
  1. 1
    Accurate cancer phenotype prediction with AKLIMATE, a stacked kernel learner integrating multimodal genomic data and pathway knowledge.

    Accurate cancer phenotype prediction with AKLIMATE, a stacked kernel learner integrating multimodal genomic data and pathway knowledge. oleh Vladislav Uzunangelov, Christopher K Wong, Joshua M Stuart

    Diterbitkan 2021-04-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  2. 2
    Computational integration of homolog and pathway gene module expression reveals general stemness signatures.

    Computational integration of homolog and pathway gene module expression reveals general stemness signatures. oleh Martina Koeva, E Camilla Forsberg, Joshua M Stuart

    Diterbitkan 2011-01-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  3. 3
    Associating transcription factors to single-cell trajectories with DREAMIT

    Associating transcription factors to single-cell trajectories with DREAMIT oleh Nathan D. Maulding, Lucas Seninge, Joshua M. Stuart

    Diterbitkan 2024-08-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  4. 4
    Biological process activity transformation of single cell gene expression for cross-species alignment

    Biological process activity transformation of single cell gene expression for cross-species alignment oleh Hongxu Ding, Andrew Blair, Ying Yang, Joshua M. Stuart

    Diterbitkan 2019-10-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  5. 5
    Dual RNA-Seq analysis of SARS-CoV-2 correlates specific human transcriptional response pathways directly to viral expression

    Dual RNA-Seq analysis of SARS-CoV-2 correlates specific human transcriptional response pathways directly to viral expression oleh Nathan D. Maulding, Spencer Seiler, Alexander Pearson, Nicholas Kreusser, Joshua M. Stuart

    Diterbitkan 2022-01-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  6. 6
    Pathway-Based Genomics Prediction using Generalized Elastic Net.

    Pathway-Based Genomics Prediction using Generalized Elastic Net. oleh Artem Sokolov, Daniel E Carlin, Evan O Paull, Robert Baertsch, Joshua M Stuart

    Diterbitkan 2016-03-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  7. 7
    The manatee variational autoencoder model for predicting gene expression alterations caused by transcription factor perturbations

    The manatee variational autoencoder model for predicting gene expression alterations caused by transcription factor perturbations oleh Ying Yang, Lucas Seninge, Ziyuan Wang, Anthony Oro, Joshua M. Stuart, Hongxu Ding

    Diterbitkan 2024-05-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  8. 8
    Prioritizing transcriptional factors in gene regulatory networks with PageRank

    Prioritizing transcriptional factors in gene regulatory networks with PageRank oleh Hongxu Ding, Ying Yang, Yuanqing Xue, Lucas Seninge, Henry Gong, Rojin Safavi, Andrea Califano, Joshua M. Stuart

    Diterbitkan 2021-01-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  9. 9
    RADIA: RNA and DNA integrated analysis for somatic mutation detection.

    RADIA: RNA and DNA integrated analysis for somatic mutation detection. oleh Amie J Radenbaugh, Singer Ma, Adam Ewing, Joshua M Stuart, Eric A Collisson, Jingchun Zhu, David Haussler

    Diterbitkan 2014-01-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  10. 10
    A factor graph nested effects model to identify networks from genetic perturbations.

    A factor graph nested effects model to identify networks from genetic perturbations. oleh Charles J Vaske, Carrie House, Truong Luu, Bryan Frank, Chen-Hsiang Yeang, Norman H Lee, Joshua M Stuart

    Diterbitkan 2009-01-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  11. 11
    Molecular signatures of quiescent, mobilized and leukemia-initiating hematopoietic stem cells.

    Molecular signatures of quiescent, mobilized and leukemia-initiating hematopoietic stem cells. oleh E Camilla Forsberg, Emmanuelle Passegué, Susan S Prohaska, Amy J Wagers, Martina Koeva, Joshua M Stuart, Irving L Weissman

    Diterbitkan 2010-01-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  12. 12
    Prophetic Granger Causality to infer gene regulatory networks.

    Prophetic Granger Causality to infer gene regulatory networks. oleh Daniel E Carlin, Evan O Paull, Kiley Graim, Christopher K Wong, Adrian Bivol, Peter Ryabinin, Kyle Ellrott, Artem Sokolov, Joshua M Stuart

    Diterbitkan 2017-01-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  13. 13
    Revealing cancer subtypes with higher-order correlations applied to imaging and omics data

    Revealing cancer subtypes with higher-order correlations applied to imaging and omics data oleh Kiley Graim, Tiffany Ting Liu, Achal S. Achrol, Evan O. Paull, Yulia Newton, Steven D. Chang, Griffith R. Harsh, Sergio P. Cordero, Daniel L. Rubin, Joshua M. Stuart

    Diterbitkan 2017-03-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  14. 14
    Common and cell-type specific responses to anti-cancer drugs revealed by high throughput transcript profiling

    Common and cell-type specific responses to anti-cancer drugs revealed by high throughput transcript profiling oleh Mario Niepel, Marc Hafner, Qiaonan Duan, Zichen Wang, Evan O. Paull, Mirra Chung, Xiaodong Lu, Joshua M. Stuart, Todd R. Golub, Aravind Subramanian, Avi Ma’ayan, Peter K. Sorger

    Diterbitkan 2017-10-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  15. 15
    Germline contamination and leakage in whole genome somatic single nucleotide variant detection

    Germline contamination and leakage in whole genome somatic single nucleotide variant detection oleh Dorota H. Sendorek, Cristian Caloian, Kyle Ellrott, J. Christopher Bare, Takafumi N. Yamaguchi, Adam D. Ewing, Kathleen E. Houlahan, Thea C. Norman, Adam A. Margolin, Joshua M. Stuart, Paul C. Boutros

    Diterbitkan 2018-01-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  16. 16
    Reproducible biomedical benchmarking in the cloud: lessons from crowd-sourced data challenges

    Reproducible biomedical benchmarking in the cloud: lessons from crowd-sourced data challenges oleh Kyle Ellrott, Alex Buchanan, Allison Creason, Michael Mason, Thomas Schaffter, Bruce Hoff, James Eddy, John M. Chilton, Thomas Yu, Joshua M. Stuart, Julio Saez-Rodriguez, Gustavo Stolovitzky, Paul C. Boutros, Justin Guinney

    Diterbitkan 2019-09-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  17. 17
    Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla.

    Identifying Aspects of the Post-Transcriptional Program Governing the Proteome of the Green Alga Micromonas pusilla. oleh Peter H Waltman, Jian Guo, Emily Nahas Reistetter, Samuel Purvine, Charles K Ansong, Marijke J van Baren, Chee-Hong Wong, Chia-Lin Wei, Richard D Smith, Stephen J Callister, Joshua M Stuart, Alexandra Z Worden

    Diterbitkan 2016-01-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  18. 18
    Valection: design optimization for validation and verification studies

    Valection: design optimization for validation and verification studies oleh Christopher I Cooper, Delia Yao, Dorota H Sendorek, Takafumi N Yamaguchi, Christine P’ng, Kathleen E Houlahan, Cristian Caloian, Michael Fraser, SMC-DNA Challenge Participants, Kyle Ellrott, Adam A Margolin, Robert G Bristow, Joshua M Stuart, Paul C Boutros

    Diterbitkan 2018-09-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  19. 19
    Combining accurate tumor genome simulation with crowdsourcing to benchmark somatic structural variant detection

    Combining accurate tumor genome simulation with crowdsourcing to benchmark somatic structural variant detection oleh Anna Y. Lee, Adam D. Ewing, Kyle Ellrott, Yin Hu, Kathleen E. Houlahan, J. Christopher Bare, Shadrielle Melijah G. Espiritu, Vincent Huang, Kristen Dang, Zechen Chong, Cristian Caloian, Takafumi N. Yamaguchi, ICGC-TCGA DREAM Somatic Mutation Calling Challenge Participants, Michael R. Kellen, Ken Chen, Thea C. Norman, Stephen H. Friend, Justin Guinney, Gustavo Stolovitzky, David Haussler, Adam A. Margolin, Joshua M. Stuart, Paul C. Boutros

    Diterbitkan 2018-11-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:
  20. 20
    Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes

    Author Correction: Pathway and network analysis of more than 2500 whole cancer genomes oleh Matthew A. Reyna, David Haan, Marta Paczkowska, Lieven P. C. Verbeke, Miguel Vazquez, Abdullah Kahraman, Sergio Pulido-Tamayo, Jonathan Barenboim, Lina Wadi, Priyanka Dhingra, Raunak Shrestha, Gad Getz, Michael S. Lawrence, Jakob Skou Pedersen, Mark A. Rubin, David A. Wheeler, Søren Brunak, Jose M. G. Izarzugaza, Ekta Khurana, Kathleen Marchal, Christian von Mering, S. Cenk Sahinalp, Alfonso Valencia, PCAWG Drivers and Functional Interpretation Working Group, Jüri Reimand, Joshua M. Stuart, Benjamin J. Raphael, PCAWG Consortium

    Diterbitkan 2022-12-01
    Dapatkan teks lengkap
    Artikel
    Simpan ke Daftar
    Disimpan di:

Alat Pencarian: