Hasil Pencarian - Anshul Kundaje

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  1. 1
    Spectrogram Analysis of Genomes

    Spectrogram Analysis of Genomes oleh David Sussillo, Anshul Kundaje, Dimitris Anastassiou

    Diterbitkan 2004-01-01
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  2. 2
    mtDNA Chromatin-like Organization Is Gradually Established during Mammalian Embryogenesis

    mtDNA Chromatin-like Organization Is Gradually Established during Mammalian Embryogenesis oleh Shani Marom, Amit Blumberg, Anshul Kundaje, Dan Mishmar

    Diterbitkan 2019-02-01
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  3. 3
    Publisher Correction: MTSplice predicts effects of genetic variants on tissue-specific splicing

    Publisher Correction: MTSplice predicts effects of genetic variants on tissue-specific splicing oleh Jun Cheng, Muhammed Hasan Çelik, Anshul Kundaje, Julien Gagneur

    Diterbitkan 2021-04-01
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  4. 4
    Deciphering the impact of genetic variation on human polyadenylation using APARENT2

    Deciphering the impact of genetic variation on human polyadenylation using APARENT2 oleh Johannes Linder, Samantha E. Koplik, Anshul Kundaje, Georg Seelig

    Diterbitkan 2022-11-01
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  5. 5
    MTSplice predicts effects of genetic variants on tissue-specific splicing

    MTSplice predicts effects of genetic variants on tissue-specific splicing oleh Jun Cheng, Muhammed Hasan Çelik, Anshul Kundaje, Julien Gagneur

    Diterbitkan 2021-03-01
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  6. 6
    Protocol for mapping the three-dimensional organization of dinoflagellate genomes

    Protocol for mapping the three-dimensional organization of dinoflagellate genomes oleh Georgi K. Marinov, Anshul Kundaje, William J. Greenleaf, Arthur R. Grossman

    Diterbitkan 2024-06-01
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  7. 7
    Vicus: Exploiting local structures to improve network-based analysis of biological data.

    Vicus: Exploiting local structures to improve network-based analysis of biological data. oleh Bo Wang, Lin Huang, Yuke Zhu, Anshul Kundaje, Serafim Batzoglou, Anna Goldenberg

    Diterbitkan 2017-10-01
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  8. 8
    Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively parallel reporter assays.

    Deciphering regulatory DNA sequences and noncoding genetic variants using neural network models of massively parallel reporter assays. oleh Rajiv Movva, Peyton Greenside, Georgi K Marinov, Surag Nair, Avanti Shrikumar, Anshul Kundaje

    Diterbitkan 2019-01-01
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  9. 9
    A predictive model of the oxygen and heme regulatory network in yeast.

    A predictive model of the oxygen and heme regulatory network in yeast. oleh Anshul Kundaje, Xiantong Xin, Changgui Lan, Steve Lianoglou, Mei Zhou, Li Zhang, Christina Leslie

    Diterbitkan 2008-11-01
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  10. 10
    The chromatin landscape of the euryarchaeon Haloferax volcanii

    The chromatin landscape of the euryarchaeon Haloferax volcanii oleh Georgi K. Marinov, S. Tansu Bagdatli, Tong Wu, Chuan He, Anshul Kundaje, William J. Greenleaf

    Diterbitkan 2023-11-01
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  11. 11
    The chromatin organization of a chlorarachniophyte nucleomorph genome

    The chromatin organization of a chlorarachniophyte nucleomorph genome oleh Georgi K. Marinov, Xinyi Chen, Tong Wu, Chuan He, Arthur R. Grossman, Anshul Kundaje, William James Greenleaf

    Diterbitkan 2022-03-01
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  12. 12
    Homogeneity in the association of body mass index with type 2 diabetes across the UK Biobank: A Mendelian randomization study.

    Homogeneity in the association of body mass index with type 2 diabetes across the UK Biobank: A Mendelian randomization study. oleh Michael Wainberg, Anubha Mahajan, Anshul Kundaje, Mark I McCarthy, Erik Ingelsson, Nasa Sinnott-Armstrong, Manuel A Rivas

    Diterbitkan 2019-12-01
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  13. 13
    Learning cis-regulatory principles of ADAR-based RNA editing from CRISPR-mediated mutagenesis

    Learning cis-regulatory principles of ADAR-based RNA editing from CRISPR-mediated mutagenesis oleh Xin Liu, Tao Sun, Anna Shcherbina, Qin Li, Inga Jarmoskaite, Kalli Kappel, Gokul Ramaswami, Rhiju Das, Anshul Kundaje, Jin Billy Li

    Diterbitkan 2021-04-01
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  14. 14
    CasKAS: direct profiling of genome-wide dCas9 and Cas9 specificity using ssDNA mapping

    CasKAS: direct profiling of genome-wide dCas9 and Cas9 specificity using ssDNA mapping oleh Georgi K. Marinov, Samuel H. Kim, S. Tansu Bagdatli, Soon Il Higashino, Alexandro E. Trevino, Josh Tycko, Tong Wu, Lacramioara Bintu, Michael C. Bassik, Chuan He, Anshul Kundaje, William J. Greenleaf

    Diterbitkan 2023-04-01
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  15. 15
    Genome-scale measurement of off-target activity using Cas9 toxicity in high-throughput screens

    Genome-scale measurement of off-target activity using Cas9 toxicity in high-throughput screens oleh David W. Morgens, Michael Wainberg, Evan A. Boyle, Oana Ursu, Carlos L. Araya, C. Kimberly Tsui, Michael S. Haney, Gaelen T. Hess, Kyuho Han, Edwin E. Jeng, Amy Li, Michael P. Snyder, William J. Greenleaf, Anshul Kundaje, Michael C. Bassik

    Diterbitkan 2017-05-01
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  16. 16
    Genetic Effects on Transcriptome Profiles in Colon Epithelium Provide Functional Insights for Genetic Risk LociSummary

    Genetic Effects on Transcriptome Profiles in Colon Epithelium Provide Functional Insights for Genetic Risk LociSummary oleh Virginia Díez-Obrero, Christopher H. Dampier, Ferran Moratalla-Navarro, Matthew Devall, Sarah J. Plummer, Anna Díez-Villanueva, Ulrike Peters, Stephanie Bien, Jeroen R. Huyghe, Anshul Kundaje, Gemma Ibáñez-Sanz, Elisabeth Guinó, Mireia Obón-Santacana, Robert Carreras-Torres, Graham Casey, Víctor Moreno

    Diterbitkan 2021-01-01
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  17. 17
    Measuring the reproducibility and quality of Hi-C data

    Measuring the reproducibility and quality of Hi-C data oleh Galip Gürkan Yardımcı, Hakan Ozadam, Michael E. G. Sauria, Oana Ursu, Koon-Kiu Yan, Tao Yang, Abhijit Chakraborty, Arya Kaul, Bryan R. Lajoie, Fan Song, Ye Zhan, Ferhat Ay, Mark Gerstein, Anshul Kundaje, Qunhua Li, James Taylor, Feng Yue, Job Dekker, William S. Noble

    Diterbitkan 2019-03-01
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  18. 18
    Mitigation of off-target toxicity in CRISPR-Cas9 screens for essential non-coding elements

    Mitigation of off-target toxicity in CRISPR-Cas9 screens for essential non-coding elements oleh Josh Tycko, Michael Wainberg, Georgi K. Marinov, Oana Ursu, Gaelen T. Hess, Braeden K. Ego, Aradhana, Amy Li, Alisa Truong, Alexandro E. Trevino, Kaitlyn Spees, David Yao, Irene M. Kaplow, Peyton G. Greenside, David W. Morgens, Douglas H. Phanstiel, Michael P. Snyder, Lacramioara Bintu, William J. Greenleaf, Anshul Kundaje, Michael C. Bassik

    Diterbitkan 2019-09-01
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  19. 19
    Enrichment of colorectal cancer associations in functional regions: Insight for using epigenomics data in the analysis of whole genome sequence-imputed GWAS data.

    Enrichment of colorectal cancer associations in functional regions: Insight for using epigenomics data in the analysis of whole genome sequence-imputed GWAS data. oleh Stephanie A Bien, Paul L Auer, Tabitha A Harrison, Conghui Qu, Charles M Connolly, Peyton G Greenside, Sai Chen, Sonja I Berndt, Stéphane Bézieau, Hyun M Kang, Jeroen Huyghe, Hermann Brenner, Graham Casey, Andrew T Chan, John L Hopper, Barbara L Banbury, Jenny Chang-Claude, Stephen J Chanock, Robert W Haile, Michael Hoffmeister, Christian Fuchsberger, Mark A Jenkins, Suzanne M Leal, Mathieu Lemire, Polly A Newcomb, Steven Gallinger, John D Potter, Robert E Schoen, Martha L Slattery, Joshua D Smith, Loic Le Marchand, Emily White, Brent W Zanke, Goncalo R Abeçasis, Christopher S Carlson, Ulrike Peters, Deborah A Nickerson, Anshul Kundaje, Li Hsu, GECCO and CCFR

    Diterbitkan 2017-01-01
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  20. 20
    The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles

    The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles oleh Jacob Schreiber, Carles Boix, Jin wook Lee, Hongyang Li, Yuanfang Guan, Chun-Chieh Chang, Jen-Chien Chang, Alex Hawkins-Hooker, Bernhard Schölkopf, Gabriele Schweikert, Mateo Rojas Carulla, Arif Canakoglu, Francesco Guzzo, Luca Nanni, Marco Masseroli, Mark James Carman, Pietro Pinoli, Chenyang Hong, Kevin Y. Yip, Jeffrey P. Spence, Sanjit Singh Batra, Yun S. Song, Shaun Mahony, Zheng Zhang, Wuwei Tan, Yang Shen, Yuanfei Sun, Minyi Shi, Jessika Adrian, Richard Sandstrom, Nina Farrell, Jessica Halow, Kristen Lee, Lixia Jiang, Xinqiong Yang, Charles Epstein, J. Seth Strattan, Bradley Bernstein, Michael Snyder, Manolis Kellis, William Stafford, Anshul Kundaje, ENCODE Imputation Challenge Participants

    Diterbitkan 2023-04-01
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