Recombination rate and selection strength in HIV intra-patient evolution. nork Richard A Neher, Thomas Leitner

Testu osoa

Inferring HIV escape rates from multi-locus genotype data nork Taylor A Kessinger, Alan S Perelson, Richard A Neher

Testu osoa

Phylodynamic theory of persistence, extinction and speciation of rapidly adapting pathogens nork Le Yan, Richard A Neher, Boris I Shraiman

Testu osoa

Joint visualization of seasonal influenza serology and phylogeny to inform vaccine composition nork Jover Lee, James Hadfield, Allison Black, Thomas R. Sibley, Richard A. Neher, Richard A. Neher, Trevor Bedford, Trevor Bedford, John Huddleston

Testu osoa

TreeKnit: Inferring ancestral reassortment graphs of influenza viruses. nork Pierre Barrat-Charlaix, Timothy G Vaughan, Richard A Neher

Testu osoa

Predicting evolution from the shape of genealogical trees nork Richard A Neher, Colin A Russell, Boris I Shraiman

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Potential impact of seasonal forcing on a SARS-CoV-2 pandemic nork Richard A. Neher, Robert Dyrdak, Valentin Druelle, Emma B. Hodcroft, Jan Albert

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Correlated evolution of nearby residues in Drosophilid proteins. nork Benjamin Callahan, Richard A Neher, Doris Bachtrog, Peter Andolfatto, Boris I Shraiman

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Genetic diversity in the interference selection limit. nork Benjamin H Good, Aleksandra M Walczak, Richard A Neher, Michael M Desai

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Population genomics of intrapatient HIV-1 evolution nork Fabio Zanini, Johanna Brodin, Lina Thebo, Christa Lanz, Göran Bratt, Jan Albert, Richard A Neher

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Challenges with using primer IDs to improve accuracy of next generation sequencing. nork Johanna Brodin, Charlotte Hedskog, Alexander Heddini, Emmanuel Benard, Richard A Neher, Mattias Mild, Jan Albert

Testu osoa

Establishment and stability of the latent HIV-1 DNA reservoir nork Johanna Brodin, Fabio Zanini, Lina Thebo, Christa Lanz, Göran Bratt, Richard A Neher, Jan Albert

Testu osoa

2019-Novel Coronavirus (2019-nCoV): estimating the case fatality rate – a word of caution nork Manuel Battegay, Richard Kuehl, Sarah Tschudin-Sutter, Hans H. Hirsch, Andreas F. Widmer, Richard A. Neher

Testu osoa

Impact of cross-border-associated cases on the SARS-CoV-2 epidemic in Switzerland during summer 2020 and 2021 nork Martina L. Reichmuth, Emma B. Hodcroft, Julien Riou, Richard A. Neher, Niel Hens, Christian L. Althaus

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Estimation and worldwide monitoring of the effective reproductive number of SARS-CoV-2 nork Jana S Huisman, Jérémie Scire, Daniel C Angst, Jinzhou Li, Richard A Neher, Marloes H Maathuis, Sebastian Bonhoeffer, Tanja Stadler

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Temporal dynamics of gene expression and histone marks at the Arabidopsis shoot meristem during flowering nork Yuan You, Aneta Sawikowska, Manuela Neumann, David Posé, Giovanna Capovilla, Tobias Langenecker, Richard A. Neher, Paweł Krajewski, Markus Schmid

Testu osoa

HIV Cell-to-Cell Spread Results in Earlier Onset of Viral Gene Expression by Multiple Infections per Cell. nork Mikaël Boullé, Thorsten G Müller, Sabrina Dähling, Yashica Ganga, Laurelle Jackson, Deeqa Mahamed, Lance Oom, Gila Lustig, Richard A Neher, Alex Sigal

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Asynchrony between virus diversity and antibody selection limits influenza virus evolution nork Dylan H Morris, Velislava N Petrova, Fernando W Rossine, Edyth Parker, Bryan T Grenfell, Richard A Neher, Simon A Levin, Colin A Russell

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Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform nork Adrian Egli, Dominique S. Blanc, Gilbert Greub, Peter M. Keller, Vladimir Lazarevic, Aitana Lebrand, Stephen Leib, Richard A. Neher, Vincent Perreten, Alban Ramette, Jacques Schrenzel, Roger Stephan, Karoline Wagner, Daniel Wüthrich, Ioannis Xenarios

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Evolution, geographic spreading, and demographic distribution of Enterovirus D68. nork Emma B Hodcroft, Robert Dyrdak, Cristina Andrés, Adrian Egli, Josiane Reist, Diego García Martínez de Artola, Julia Alcoba-Flórez, Hubert G M Niesters, Andrés Antón, Randy Poelman, Marijke Reynders, Elke Wollants, Richard A Neher, Jan Albert

Testu osoa