Ohcanbohtosat - Jeroen Raes

CoNet app: inference of biological association networks using Cytoscape [version 2; referees: 2 approved] Dahkki Karoline Faust, Jeroen Raes

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Systematic optimization of fermentation conditions for in vitro fermentations with fecal inocula Dahkki Jonas Poppe, Sara Vieira-Silva, Sara Vieira-Silva, Jeroen Raes, Jeroen Raes, Kristin Verbeke, Kristin Verbeke, Gwen Falony, Gwen Falony, Gwen Falony

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Prebiotic Wheat Bran Fractions Induce Specific Microbiota Changes Dahkki Kevin D’hoe, Kevin D’hoe, Kevin D’hoe, Lorenza Conterno, Lorenza Conterno, Francesca Fava, Gwen Falony, Gwen Falony, Sara Vieira-Silva, Sara Vieira-Silva, Joan Vermeiren, Kieran Tuohy, Jeroen Raes, Jeroen Raes, Jeroen Raes

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Expanding the scope and scale of microbiome research Dahkki Rob Knight, Ruth E. Ley, Jeroen Raes, Elizabeth A. Grice

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Short chain fatty acids and its producing organisms: An overlooked therapy for IBD? Dahkki Sara Deleu, Kathleen Machiels, Jeroen Raes, Kristin Verbeke, Séverine Vermeire

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How informative is the mouse for human gut microbiota research? Dahkki Thi Loan Anh Nguyen, Sara Vieira-Silva, Adrian Liston, Jeroen Raes

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A nitrile hydratase in the eukaryote Monosiga brevicollis. Dahkki Konrad U Foerstner, Tobias Doerks, Jean Muller, Jeroen Raes, Peer Bork

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Universally distributed single-copy genes indicate a constant rate of horizontal transfer. Dahkki Christopher J Creevey, Tobias Doerks, David A Fitzpatrick, Jeroen Raes, Peer Bork

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Gut microbiome and intestinal inflammation in preclinical stages of rheumatoid arthritis Dahkki Celine Lamacchia, Delphine Courvoisier, Jeroen Raes, Olivia Studer, Raul Yhossef Tito Tadeo

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The probiotic Butyricicoccus pullicaecorum reduces feed conversion and protects from potentially harmful intestinal microorganisms in broilers Dahkki Venessa Eeckhaut, Jun Wang, Jun Wang, Alexander Van Parys, Freddy Haesebrouck, Marie Joossens, Marie Joossens, Gwen Falony, Gwen Falony, Jeroen Raes, Jeroen Raes, Richard Ducatelle, Filip Van Immerseel

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The role of short-chain fatty acids (SCFAs) in regulating stress responses, eating behavior, and nutritional state in anorexia nervosa: protocol for a randomized controlled trial Dahkki Robin Quagebeur, Boushra Dalile, Jeroen Raes, Lukas Van Oudenhove, Kristin Verbeke, Elske Vrieze

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Benchmarking microbiome transformations favors experimental quantitative approaches to address compositionality and sampling depth biases Dahkki Verónica Lloréns-Rico, Sara Vieira-Silva, Pedro J. Gonçalves, Gwen Falony, Jeroen Raes

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The Genomic Sequence of the Oral Pathobiont Strain NI1060 Reveals Unique Strategies for Bacterial Competition and Pathogenicity. Dahkki Youssef Darzi, Yizu Jiao, Mizuho Hasegawa, Henry Moon, Gabriel Núñez, Naohiro Inohara, Jeroen Raes

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Technical versus biological variability in a synthetic human gut community Dahkki Charlotte van de Velde, Clémence Joseph, Kenneth Simoens, Jeroen Raes, Kristel Bernaerts, Karoline Faust

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A molecular study of microbe transfer between distant environments. Dahkki Sean D Hooper, Jeroen Raes, Konrad U Foerstner, Eoghan D Harrington, Daniel Dalevi, Peer Bork

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Microbial co-occurrence relationships in the human microbiome. Dahkki Karoline Faust, J Fah Sathirapongsasuti, Jacques Izard, Nicola Segata, Dirk Gevers, Jeroen Raes, Curtis Huttenhower

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Gut microbiota response to in vitro transit time variation is mediated by microbial growth rates, nutrient use efficiency and adaptation to in vivo transit time Dahkki Yorick Minnebo, Karen Delbaere, Valerie Goethals, Jeroen Raes, Tom Van de Wiele, Kim De Paepe

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Sputum Bacterial Metacommunities in Distinguishing Heterogeneity in Respiratory Health and Disease Dahkki Jiyeon Si, Jiyeon Si, Jiyeon Si, Yongbin Choi, Yongbin Choi, Jeroen Raes, Jeroen Raes, Gwangpyo Ko, Gwangpyo Ko, Gwangpyo Ko, Gwangpyo Ko, Hyun Ju You, Hyun Ju You, Hyun Ju You, Hyun Ju You

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Trial in Elderly with Musculoskeletal Problems due to Underlying Sarcopenia—Faeces to Unravel the Gut and Inflammation Translationally (TEMPUS-FUGIT): protocol of a cross-sequentia... Dahkki Laurence Lapauw, Jolan Dupont, Nadjia Amini, Laura Vercauteren, Sabine Verschueren, Jos Tournoy, Jeroen Raes, Evelien Gielen

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The Effect of ß-Glucan Prebiotic on Kidney Function, Uremic Toxins and Gut Microbiome in Stage 3 to 5 Chronic Kidney Disease (CKD) Predialysis Participants: A Randomized Controlled... Dahkki Zarina Ebrahim, Sebastian Proost, Raul Yhossef Tito, Jeroen Raes, Griet Glorieux, Mohammed Rafique Moosa, Renée Blaauw

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