Comparative Genomics of <i>Escherichia coli</i> Serotype O55:H7 Using Complete Closed Genomes od Margaret D. Weinroth, James L. Bono

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The GEA pipeline for characterizing Escherichia coli and Salmonella genomes od Aaron M. Dickey, John W. Schmidt, James L. Bono, Manita Guragain

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Shiga-toxigenic Escherichia coli O157 in Agricultural Fair Livestock, United States od James E. Keen, Thomas E. Wittum, John R. Dunn, James L. Bono, Lisa M. Durso

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Pathogenomes of Shiga Toxin Positive and Negative <i>Escherichia coli</i> O157:H7 Strains TT12A and TT12B: Comprehensive Phylogenomic Analysis Using Closed Genomes od Anwar A. Kalalah, Sara S. K. Koenig, Peter Feng, Joseph M. Bosilevac, James L. Bono, Mark Eppinger

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Genome Sequence of the Thermotolerant Foodborne Pathogen <named-content content-type="genus-species">Salmonella enterica</named-content> Serovar Senftenberg ATCC 43845 and Phylogen... od Scott V. Nguyen, Gregory P. Harhay, James L. Bono, Timothy P. L. Smith, Dayna M. Harhay

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Genomic-based identification of environmental and clinical Listeria monocytogenes strains associated with an abortion outbreak in beef heifers od Katherine J. Whitman, James L. Bono, Michael L. Clawson, John D. Loy, Joseph M. Bosilevac, Terrance M. Arthur, Jeff D. Ondrak

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Rates of evolutionary change of resident Escherichia coli O157:H7 differ within the same ecological niche od Margaret D. Weinroth, Michael L. Clawson, Terrance M. Arthur, James E. Wells, Dayna M. Brichta-Harhay, Norval Strachan, James L. Bono

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Pathogenomes and virulence profiles of representative big six non-O157 serogroup Shiga toxin-producing Escherichia coli od Anwar A. Kalalah, Anwar A. Kalalah, Sara S. K. Koenig, Sara S. K. Koenig, James L. Bono, Joseph M. Bosilevac, Mark Eppinger, Mark Eppinger

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Whole genome sequencing of Moraxella bovis strains from North America reveals two genotypes with different genetic determinants od Emily L. Wynn, Matthew M. Hille, John Dustin Loy, Gennie Schuller, Kristen L. Kuhn, Aaron M. Dickey, James L. Bono, Michael L. Clawson

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Escherichia coli O157:H7 tir 255 T > A allele strains differ in chromosomal and plasmid composition od Margaret D. Weinroth, Michael L. Clawson, Gregory P. Harhay, Mark Eppinger, Mark Eppinger, Dayna M. Harhay, Timothy P. L. Smith, James L. Bono

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Canonical Single Nucleotide Polymorphisms (SNPs) for High-Resolution Subtyping of Shiga-Toxin Producing Escherichia coli (STEC) O157:H7. od Sean M Griffing, Duncan R MacCannell, Amber J Schmidtke, Molly M Freeman, Eija Hyytiä-Trees, Peter Gerner-Smidt, Efrain M Ribot, James L Bono

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Genomic analysis of shiga toxin-containing Escherichia coli O157:H7 isolated from Argentinean cattle. od Ariel Amadio, James L Bono, Matías Irazoqui, Mariano Larzábal, Wanderson Marques da Silva, María Florencia Eberhardt, Nahuel A Riviere, David Gally, Shannon D Manning, Angel Cataldi

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Genomic analysis of shiga toxin-containing Escherichia coli O157:H7 isolated from Argentinean cattle od Ariel Amadio, James L. Bono, Matías Irazoqui, Mariano Larzábal, Wanderson Marques da Silva, María Florencia Eberhardt, Nahuel A. Riviere, David Gally, Shannon D. Manning, Angel Cataldi

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Genomic and Phenotypic Characterization of Shiga Toxin-Producing <i>Escherichia albertii</i> Strains Isolated from Wild Birds in a Major Agricultural Region in California od Michelle Qiu Carter, Beatriz Quiñones, Xiaohua He, Antares Pham, Diana Carychao, Michael B. Cooley, Chien-Chi Lo, Patrick S. G. Chain, Rebecca L. Lindsey, James L. Bono

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Characterisation of Early Positive <i>mcr-1</i> Resistance Gene and Plasmidome in <i>Escherichia coli</i> Pathogenic Strains Associated with Variable Phylogroups under Colistin Sel... od Guerrino Macori, Scott V. Nguyen, Ankita Naithani, Daniel Hurley, Li Bai, Farid El Garch, Frédérique Woehrlé, Christine Miossec, Benjamin Roques, Peadar O’Gaora, James L. Bono, Séamus Fanning

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Comparison of whole genome sequences from human and non-human Escherichia coli O26 strains od Keri N Norman, Michael L Clawson, Nancy N Strockbine, Robert E Mandrell, Roger eJohnson, Kim eZiebell, Shaohua eZhao, Pina M Fratamico, Robert eStones, Marc W Allard, James L Bono

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Shiga toxin sub-type 2a increases the efficiency of Escherichia coli O157 transmission between animals and restricts epithelial regeneration in bovine enteroids. od Stephen F Fitzgerald, Amy E Beckett, Javier Palarea-Albaladejo, Sean McAteer, Sharif Shaaban, Jason Morgan, Nur Indah Ahmad, Rachel Young, Neil A Mabbott, Liam Morrison, James L Bono, David L Gally, Tom N McNeilly

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Pathogenomes of Atypical Non-shigatoxigenic Escherichia coli NSF/SF O157:H7/NM: Comprehensive Phylogenomic Analysis Using Closed Genomes od Emmanuel C. Nyong, Emmanuel C. Nyong, Sam R. Zaia, Sam R. Zaia, Anna Allué-Guardia, Anna Allué-Guardia, Armando L. Rodriguez, Zaina Irion-Byrd, Zaina Irion-Byrd, Sara S. K. Koenig, Sara S. K. Koenig, Peter Feng, James L. Bono, Mark Eppinger, Mark Eppinger

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Differences between predicted outer membrane proteins of genotype 1 and 2 Mannheimia haemolytica od Michael L. Clawson, Gennie Schuller, Aaron M. Dickey, James L. Bono, Robert W. Murray, Michael T. Sweeney, Michael D. Apley, Keith D. DeDonder, Sarah F. Capik, Robert L. Larson, Brian V. Lubbers, Brad J. White, Jochen Blom, Carol G. Chitko-McKown, Dayna M. Brichta-Harhay, Timothy P. L. Smith

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