An adversarial training framework for mitigating algorithmic biases in clinical machine learning ‌ Jenny Yang, Andrew A. S. Soltan, David W. Eyre, Yang Yang, David A. Clifton

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Probabilistic modelling of effects of antibiotics and calendar time on transmission of healthcare-associated infection ‌ Mirjam Laager, Ben S. Cooper, David W. Eyre, the CDC Modeling Infectious Diseases in Healthcare Program (MInD-Healthcare)

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BugMat and FindNeighbour: command line and server applications for investigating bacterial relatedness ‌ Oriol Mazariegos-Canellas, Trien Do, Tim Peto, David W. Eyre, Anthony Underwood, Derrick Crook, David H. Wyllie

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The quality of vital signs measurements and value preferences in electronic medical records varies by hospital, specialty, and patient demographics ‌ Niall Jackson, Jessica Woods, Peter Watkinson, Andrew Brent, Tim E. A. Peto, A. Sarah Walker, David W. Eyre

Ստացեք ամբողջական տեքստը

Time-of-Day Variation in SARS-CoV-2 RNA Levels during the Second Wave of COVID-19 ‌ Xiaodong Zhuang, Wei Wang, Helene Borrmann, Peter Balfe, Philippa C. Matthews, David W. Eyre, Elizabeth B. Klerman, Jane A. McKeating

Ստացեք ամբողջական տեքստը

Detection of mixed infection from bacterial whole genome sequence data allows assessment of its role in Clostridium difficile transmission. ‌ David W Eyre, Madeleine L Cule, David Griffiths, Derrick W Crook, Tim E A Peto, A Sarah Walker, Daniel J Wilson

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Probabilistic transmission models incorporating sequencing data for healthcare-associated Clostridioides difficile outperform heuristic rules and identify strain-specific differenc... ‌ David W Eyre, Mirjam Laager, A Sarah Walker, Ben S Cooper, Daniel J Wilson, CDC Modeling Infectious Diseases in Healthcare Program (MInD-Healthcare)

Ստացեք ամբողջական տեքստը

Improving patient flow during infectious disease outbreaks using machine learning for real-time prediction of patient readiness for discharge. ‌ Jennifer A Bishop, Hamza A Javed, Rasheed El-Bouri, Tingting Zhu, Thomas Taylor, Tim Peto, Peter Watkinson, David W Eyre, David A Clifton

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Human and Porcine Transmission of Clostridioides difficile Ribotype 078, Europe ‌ Geraldine Moloney, David W. Eyre, Micheál Mac Aogáin, Máire C. McElroy, Alison Vaughan, Tim E.A. Peto, Derrick W. Crook, Thomas R. Rogers

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Asymptomatic Clostridium difficile colonisation and onward transmission. ‌ David W Eyre, David Griffiths, Alison Vaughan, Tanya Golubchik, Milind Acharya, Lily O'Connor, Derrick W Crook, A Sarah Walker, Tim E A Peto

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RNA polymerase mutations cause cephalosporin resistance in clinical Neisseria gonorrhoeae isolates ‌ Samantha G Palace, Yi Wang, Daniel HF Rubin, Michael A Welsh, Tatum D Mortimer, Kevin Cole, David W Eyre, Suzanne Walker, Yonatan H Grad

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Major genetic discontinuity and novel toxigenic species in Clostridioides difficile taxonomy ‌ Daniel R Knight, Korakrit Imwattana, Brian Kullin, Enzo Guerrero-Araya, Daniel Paredes-Sabja, Xavier Didelot, Kate E Dingle, David W Eyre, César Rodríguez, Thomas V Riley

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Development and validation of early warning score systems for COVID‐19 patients ‌ Alexey Youssef, Samaneh Kouchaki, Farah Shamout, Jacob Armstrong, Rasheed El‐Bouri, Thomas Taylor, Drew Birrenkott, Baptiste Vasey, Andrew Soltan, Tingting Zhu, David A. Clifton, David W. Eyre

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Clostridium difficile trehalose metabolism variants are common and not associated with adverse patient outcomes when variably present in the same lineageResearch in context ‌ David W. Eyre, Xavier Didelot, Anthony M. Buckley, Jane Freeman, Ines B. Moura, Derrick W. Crook, Tim E.A. Peto, A. Sarah Walker, Mark H. Wilcox, Kate E. Dingle

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Predicting future hospital antimicrobial resistance prevalence using machine learning ‌ Karina-Doris Vihta, Emma Pritchard, Koen B. Pouwels, Susan Hopkins, Rebecca L. Guy, Katherine Henderson, Dimple Chudasama, Russell Hope, Berit Muller-Pebody, Ann Sarah Walker, David Clifton, David W. Eyre

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Transmission of community- and hospital-acquired SARS-CoV-2 in hospital settings in the UK: A cohort study. ‌ Yin Mo, David W Eyre, Sheila F Lumley, Timothy M Walker, Robert H Shaw, Denise O'Donnell, Lisa Butcher, Katie Jeffery, Christl A Donnelly, Oxford COVID infection review team, Ben S Cooper

Ստացեք ամբողջական տեքստը

Short-term genome stability of serial Clostridium difficile ribotype 027 isolates in an experimental gut model and recurrent human disease. ‌ David W Eyre, A Sarah Walker, Jane Freeman, Simon D Baines, Warren N Fawley, Caroline H Chilton, David Griffiths, Alison Vaughan, Derrick W Crook, Tim E A Peto, Mark H Wilcox

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Penicillin Binding Protein Substitutions Cooccur with Fluoroquinolone Resistance in Epidemic Lineages of Multidrug-Resistant Clostridioides difficile ‌ Kate E. Dingle, Jane Freeman, Xavier Didelot, T. Phuong Quan, David W. Eyre, Jeremy Swann, William D. Spittal, Emma V. Clark, Keith A. Jolley, A. Sarah Walker, Mark H. Wilcox, Derrick W. Crook

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Retrospective analysis of hospital electronic health records reveals unseen cases of acute hepatitis with unknown aetiology in adults in Oxfordshire ‌ Cedric C. S. Tan, Gavin Kelly, Jack Cregan, Joseph D. Wilson, Tim James, Meera Chand, Susan Hopkins, Maaike Swets, J. Kenneth Baillie, Katie Jeffery, Ann Sarah Walker, David W. Eyre, Nicole Stoesser, Philippa C. Matthews

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Genomic epidemiology describes introduction and outbreaks of antifungal drug-resistant Candida auris ‌ Dana Kappel, Hugh Gifford, Amelie Brackin, Alireza Abdolrasouli, David W. Eyre, Katie Jeffery, Silke Schlenz, David M. Aanensen, Colin S. Brown, Andrew Borman, Elizabeth Johnson, Alison Holmes, Darius Armstrong-James, Matthew C. Fisher, Johanna Rhodes

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